LOCUS BC022075 1237 bp mRNA linear HUM 28-JUL-2005
DEFINITION Homo sapiens LysM, putative peptidoglycan-binding, domain
containing 2, mRNA (cDNA clone MGC:33320 IMAGE:4799858), complete
cds.
ACCESSION BC022075
VERSION BC022075.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1237)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1237)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (22-JAN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 46 Row: c Column: 11
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis, GenomeScan gene prediction.
FEATURES Location/Qualifiers
source 1..1237
/db_xref="H-InvDB:HIT000039385"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:33320 IMAGE:4799858"
/tissue_type="Brain, hypothalamus"
/clone_lib="NIH_MGC_96"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..1237
/gene="LYSMD2"
/gene_synonym="MGC35274"
/db_xref="GeneID:256586"
CDS 320..694
/gene="LYSMD2"
/gene_synonym="MGC35274"
/codon_start=1
/product="LYSMD2 protein"
/protein_id="AAH22075.1"
/db_xref="GeneID:256586"
/translation="MEQIKRANKLFTNDCIFLKKTLNIPVISEKPLLFNGLNSIDSPE
NETADNSFSQEEEPVVAGEDLPPPSPQESDVQPVQPEEVSARDFLQRLDLQIKLSTQA
AKKLKEESRDEESPYATSLYHS"
BASE COUNT 357 a 259 c 286 g 335 t
ORIGIN
1 agcgggctgg gcgcggcgcc ggggcgcgcg gctgcagcgg agcaggctgg gaagcgtagt
61 tcccggctga gcctcgccgc ggccccgcag tcccccagcc ccgcccttcc ccgacaggtg
121 tcctctcccg gaatcggggt ctgaaccccg ccacagctct gcaggggagg aagcacctgg
181 gtcggggaga agcctgggca ggctctttgg agacgctcgg ggctccggag agcgtggatg
241 gcaaaggctt tcaagcctgt gatgagcatt cctgtgagcg agcatcctga cacggaagcc
301 gcgttgagag cggtctcaga tggaacagat taaaagggcc aataaactgt ttaccaatga
361 ttgtatattt ctgaagaaaa ctttgaacat cccagttata tcagagaagc ctttgttgtt
421 taatggactt aactccattg attctccaga aaatgaaact gctgataaca gtttttctca
481 ggaagaggag ccagtggtgg ccggggaaga cctccctcct cccagtcctc aagaatctga
541 tgttcagcct gtgcagcctg aggaagtgtc agccagagat ttcctgcaga gacttgactt
601 gcagattaag ttatcaacac aggcagccaa gaagctaaaa gaagagagca gagatgaaga
661 aagtccctat gcaacttccc tctatcacag ttaggtgatt tgggggcata actctaacca
721 aaattaagat atgtttggac cataaagaat ccaacaactg aagattcaaa aacatccctt
781 ctggattcct atagtgtcca tcttaaaatc ataactaggt agttctacct gctgcactga
841 agtgattagt tccctctggc tttctataat tttaagtctt tattatggca tgatggcaag
901 gttgtagcct aaagctcatc acttttgtag gtggtgttag tttttagact agcttttata
961 aatactaatt gacataaagc atcaaagatt atttatatat ttaggctaaa aataatgttt
1021 atctccttat gcaatcctga ttatgtgaaa atatggttgc tgtttaagtg atgctgaatt
1081 tgctgtgtgt ttataactta agtgctatat atatatttcg atgtcttaca tattctctat
1141 taatataaag aaccaaattt tgtctgctat tttgtaaaaa taaactacaa aagcctgaat
1201 gagaaaataa actatgtttt caaaaaaaaa aaaaaaa
//