LOCUS BC022061 2160 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens protein phosphatase 1G (formerly 2C),
magnesium-dependent, gamma isoform, mRNA (cDNA clone MGC:2870
IMAGE:2988852), complete cds.
ACCESSION BC022061
VERSION BC022061.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2160)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2160)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (22-JAN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC022061.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 3 Row: b Column: 21
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis.
FEATURES Location/Qualifiers
source 1..2160
/db_xref="H-InvDB:HIT000039377"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:2870 IMAGE:2988852"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_20"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2160
/gene="PPM1G"
/gene_synonym="MGC1675"
/gene_synonym="MGC2870"
/gene_synonym="PP2CG"
/gene_synonym="PP2CGAMMA"
/gene_synonym="PPP2CG"
/db_xref="GeneID:5496"
/db_xref="HGNC:HGNC:9278"
/db_xref="MIM:605119"
CDS 108..1748
/gene="PPM1G"
/gene_synonym="MGC1675"
/gene_synonym="MGC2870"
/gene_synonym="PP2CG"
/gene_synonym="PP2CGAMMA"
/gene_synonym="PPP2CG"
/codon_start=1
/product="protein phosphatase 1G (formerly 2C),
magnesium-dependent, gamma isoform"
/protein_id="AAH22061.1"
/db_xref="GeneID:5496"
/db_xref="HGNC:HGNC:9278"
/db_xref="MIM:605119"
/translation="MGAYLSQPNTVKCSGDGVGAPRLPLPYGFSAMQGWRVSMEDAHN
CIPELDSETAMFSVYDGHGGEEVALYCAKYLPDIIKDQKAYKEGKLQKALEDAFLAID
AKLTTEEVIKELAQIAGRPTEDEDEKEKVADEDDVDNEEAALLHEEATMTIEELLTRY
GQNCHKGPPHSKSGGGTGEEPGSQGLNGEAGPEDSTRETPSQENGPTAKAYTGFSSNS
ERGTEAGQVGEPGIPTGEAGPSCSSASDKLPRVAKSKFFEDSEDESDEAEEEEEDSEE
CSEEEDGYSSEEAENEEDEDDTEEAEEDDEEEEEEMMVPGMEGKEEPGSDSGTTAVVA
LIRGKQLIVANAGDSRCVVSEAGKALDMSYDHKPEDEVELARIKNAGGKVTMDGRVNG
GLNLSRAIGDHFYKRNKNLPPEEQMISALPDIKVLTLTDDHEFMVIACDGIWNVMSSQ
EVVDFIQSKISQRDENGELRLLSSIVEELLDQCLAPDTSGDGTGCDNMTCIIICFKPR
NTAELQPESGKRKLEEVLSTEGAEENGNSDKKKKAKRD"
BASE COUNT 546 a 543 c 629 g 442 t
ORIGIN
1 gtcccgttac cgcctcctgc tcctgccgcg cgcacccccg gggcttcggc tccggcacgg
61 gtcgcgccca gctttcctgc acctgaggcc gccggccagc cgccgccatg ggtgcctacc
121 tctcccagcc caacacggtg aagtgctccg gggacggggt cggcgccccg cgcctgccgc
181 tgccctacgg cttctccgcc atgcaaggct ggcgcgtctc catggaggat gctcacaact
241 gtattcctga gctggacagt gagacagcca tgttttctgt ctacgatgga catggagggg
301 aggaagttgc cttgtactgt gccaaatatc ttcctgatat catcaaagat cagaaggcct
361 acaaggaagg caagctacag aaggctttag aagatgcctt cttggctatt gacgccaaat
421 tgaccactga agaagtcatt aaagagctgg cacagattgc agggcgaccc actgaggatg
481 aagatgaaaa agaaaaagta gctgatgaag atgatgtgga caatgaggag gctgcactgc
541 tgcatgaaga ggctaccatg actattgaag agctgctgac acgctacggg cagaactgtc
601 acaagggccc tccccacagc aaatctggag gtgggacagg cgaggaacca gggtcccagg
661 gcctcaatgg ggaggcagga cctgaggact caactaggga aactccttca caagaaaatg
721 gccccacagc caaggcctac acaggctttt cctccaactc ggaacgtggg actgaggcag
781 gccaagttgg tgagcctggc attcccactg gtgaggctgg gccttcctgc tcttcagcct
841 ctgacaagct gcctcgagtt gctaagtcca agttctttga ggacagtgag gatgagtcag
901 atgaggcgga ggaagaagag gaagacagtg aggaatgcag cgaggaagag gatggctaca
961 gcagtgagga ggcagagaat gaggaagatg aggatgacac cgaggaggct gaagaggacg
1021 atgaagaaga agaagaagag atgatggtgc cagggatgga aggcaaagag gagcctggct
1081 ctgacagtgg tacaacagcg gtggtggccc tgatacgagg gaagcagttg attgtagcca
1141 acgcaggaga ctctcgctgt gtggtatctg aggctggcaa agctttagac atgtcctatg
1201 atcacaaacc agaggatgaa gtagaactag cacgcatcaa gaatgctggt ggcaaggtca
1261 ccatggatgg gcgagtcaac gggggcctca acctctccag agccattggg gaccacttct
1321 ataagagaaa caagaacctg ccacctgagg aacagatgat ttcagccctt cctgacatca
1381 aggtgctgac tctcactgac gaccatgaat tcatggtcat tgcctgtgat ggcatctgga
1441 atgtgatgag cagccaggaa gttgtagatt tcattcaatc aaagatcagc cagcgtgatg
1501 aaaatgggga gcttcggtta ttgtcatcca ttgtggaaga gctgctggat cagtgcctgg
1561 caccagacac ttctggggat ggtacagggt gtgacaacat gacctgcatc atcatttgct
1621 tcaagccccg aaacacagca gagctccagc cagagagtgg caagcgaaaa ctagaggagg
1681 tgctctctac tgagggggct gaagaaaatg gcaacagcga caagaagaag aaggccaagc
1741 gagactagca gtcatccaga cccctgccca cctagactgt tttctgagcc ctccggacct
1801 gagactgagt tttgtctttt tcctttagcc ttagcagtgg gtatgaggtg tgcaggggga
1861 gctgggtggc ttcactccgc ccattccaaa gagggctctc cctccacact gcagccggga
1921 gcctctgctg tccttcccag ccgcctctgc tcctcgggct catcaccggt tctgtgcctg
1981 tgctctgttg tgttggaggg aaggactggc ggttctggtt tttactctgt gaactttatt
2041 taaggacatt cttttttatt ggcggctcca tggccctcgg ccgcttgcac ccgctctctg
2101 ttgtacactt tcaatcaaca ctttttcaga ctaaaggcca aaacctaaaa aaaaaaaaaa
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