LOCUS BC021985 3022 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens component of oligomeric golgi complex 1, mRNA (cDNA
clone MGC:2368 IMAGE:2821581), complete cds.
ACCESSION BC021985
VERSION BC021985.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3022)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3022)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (22-JAN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Oct 8, 2003 this sequence version replaced BC021985.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 2 Row: i Column: 23
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 21237782.
FEATURES Location/Qualifiers
source 1..3022
/db_xref="H-InvDB:HIT000039329"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:2368 IMAGE:2821581"
/tissue_type="Lung, small cell carcinoma"
/clone_lib="NIH_MGC_7"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..3022
/gene="COG1"
/gene_synonym="DKFZp762L1710"
/gene_synonym="KIAA1381"
/db_xref="GeneID:9382"
/db_xref="HGNC:HGNC:6545"
/db_xref="MIM:606973"
CDS 2..2944
/gene="COG1"
/gene_synonym="DKFZp762L1710"
/gene_synonym="KIAA1381"
/codon_start=1
/product="component of oligomeric golgi complex 1"
/protein_id="AAH21985.1"
/db_xref="GeneID:9382"
/db_xref="HGNC:HGNC:6545"
/db_xref="MIM:606973"
/translation="MATAATSPALKRLDLRDPAALFETHGAEEIRGLERQVRAEIEHK
KEELRQMVGERYRDLIEAADTIGQMRRCAVGLVDAVKATDQYCARLRQAGSAAPRPPR
AQQPQQPSQEKFYSMAAQIKLLLEIPEKIWSSMEASQCLHATQLYLLCCHLHSLLQLD
SSSSRYSPVLSRFPILIRQVAAASHFRSTILHESKMLLKCQGVSDQAVAEALCSIMLL
EESSPRQALTDFLLARKATIQKLLNQPHHGAGIKAQICSLVELLATTLKQAHALFYTL
PEGLLPDPALPCGLLFSTLETITGQHPAGKGTGVLQEEMKLCSWFKHLPASIVEFQPT
LRTLAHPISQEYLKDTLQKWIHMCNEDIKNGITNLLMYVKSMKGLAGIRDAMWELLTN
ESTNHSWDVLCRRLLEKPLLFWEDMMQQLFLDRLQTLTKEGFDSISSSSKELLVSALQ
ELESSTSNSPSNKHIHFEYNMSLFLWSESPNDLPSDAAWVSVANRGQFASSGLSMKAQ
AISPCVQNFCSALDSKLKVKLDDLLAYLPSDDSSLPKDVSPTQAKSSAFDRYADAGTV
QEMLRTQSVACIKHIVDCIRAELQSIEEGVQGQQDALNSAKLHSVLFMARLCQSLGEL
CPHLKQCILGKSESSEKPAREFRALRKQGKVKTQEIIPTQAKWQEVKEVLLQQSVMGY
QVWSSAVVKVLIHGFTQSLLLDDAGSVLATATSWDELEIQEEAESGSSVTSKIRLPAQ
PSWYVQSFLFSLCQEINRVGGHALPKVTLQEMLKSCMVQVVAAYEKLSEEKQIKKEGA
FPVTQNRALQLLYDLRYLNIVLTAKGDEVKSGRSKPDSRIEKVTDHLEALIDPFDLDV
FTPHLNSNLHRLVQRTSVLFGLVTGTENQLAPRSSTFNSQEPHNILPLASSQIRFGLL
PLSMTSTRKAKSTRNIETKAQVVPPARSTAGDPTVPGSLFRQLVSEEDNTSAPSLFKL
GWLSSMTK"
BASE COUNT 764 a 857 c 758 g 643 t
ORIGIN
1 catggccacc gcggcaacct cacccgcgct gaagcggctg gatctgcgcg accctgcggc
61 tcttttcgag acgcatggag cggaggagat ccgcgggctg gagcgccagg ttcgggccga
121 gatcgagcac aagaaggagg agctgcggca gatggtgggc gaacggtacc gcgacctgat
181 cgaggcggcc gacaccatcg gccagatgcg ccgctgcgcc gtggggctag tggacgccgt
241 gaaggccacc gaccagtact gcgcccgcct ccgccaggcc ggctcggccg cgccccggcc
301 accgcgggcc cagcagccac agcagccatc ccaggagaag ttctacagca tggctgccca
361 gatcaagcta ctcttagaaa ttccggagaa gatctggagc tcgatggaag cctctcagtg
421 tctccacgcc acacagctct acctgctctg ctgccacctc cacagcctgc tccagctgga
481 ttcttctagt tcccgataca gtcccgtcct ctcccggttt cctatactca tccggcaggt
541 ggcagccgcc agccacttcc ggtcaactat tctgcatgaa agcaagatgt tgctcaaatg
601 ccaaggtgtg tctgaccaag ctgtggccga ggccctgtgc tctataatgc tcttagaaga
661 gagttctcct cgccaagccc tcacagactt cctgctggcc agaaaggcaa ctattcagaa
721 acttctcaac cagccacacc atggtgctgg tatcaaggct cagatttgct cattagtgga
781 gttgctggcc accactctga agcaagctca tgcccttttc tacactttgc cagaaggact
841 gctgccagat ccagccctgc catgtggctt gctcttctct actctggaga ccatcacagg
901 ccagcatcct gccggaaagg gcactggtgt cctgcaggaa gagatgaaac tctgcagctg
961 gtttaaacac ctgccagcat ccatcgtcga gttccagcca acactccgaa cccttgcaca
1021 tcccatcagt caggaatacc tgaaagacac gctgcagaaa tggatccaca tgtgtaatga
1081 agacattaaa aatgggatca ccaacctgct catgtacgtg aagagcatga agggtctcgc
1141 gggaatccgg gacgccatgt gggagttact taccaatgag tccaccaatc acagctggga
1201 tgtgctatgt cggcggcttc tggagaagcc gctcttgttc tgggaagata tgatgcagca
1261 actgttcctt gaccgattac agactctgac aaaagaaggc tttgactcca tctccagtag
1321 ctccaaggag ctcttggttt cagctttgca ggaacttgaa agcagcacca gcaactcccc
1381 ttcaaataag cacatccact ttgagtacaa catgtcgctc ttcctctggt ctgagagtcc
1441 taatgacctg ccttccgatg cggcctgggt cagcgtggca aaccggggtc agtttgccag
1501 tagcggcctc tccatgaaag cacaagccat cagcccttgt gtacagaact tctgttctgc
1561 cctggattct aagctgaagg ttaaactaga tgacctcctg gcttacctcc cctctgatga
1621 ctcatcactg cccaaggacg tttctcccac acaggccaag agttctgcct ttgacagata
1681 cgcagatgcg gggaccgtgc aggagatgct gcggactcag tccgtggcat gcatcaagca
1741 catcgtggac tgcatccggg cagagctaca gagcattgaa gagggtgtgc aagggcaaca
1801 ggatgccctc aacagtgcca agctgcactc agttcttttc atggccagac tctgccagtc
1861 cctgggagag ctgtgccccc atctgaagca gtgcatcctg ggaaaatcag agagctcaga
1921 gaaaccagca agggagttta gggctctgag aaaacaggga aaggtgaaaa ctcaggaaat
1981 cattcctaca caggccaagt ggcaagaggt taaagaagta ctcctccagc agagcgtgat
2041 gggctaccag gtctggagca gtgcagttgt gaaagttttg attcatggat tcacccagtc
2101 attacttcta gatgatgctg gctcagttct ggccacagcc accagctggg atgagctaga
2161 aattcaggag gaggcagagt ctggcagcag tgtcacatcc aagatccgac tccctgcaca
2221 gccgtcctgg tatgtacagt ccttcctgtt tagtttatgc caggaaatta atcgggttgg
2281 aggccatgcc ttgccaaagg tgacattaca ggagatgctg aaaagctgta tggttcaagt
2341 agtagctgcc tatgagaaac tctccgaaga aaaacagatt aagaaagaag gtgcatttcc
2401 agtcacccag aaccgggcgc tgcagctgct ttatgatctg cgttacctca acattgttct
2461 gacagccaag ggtgacgagg tgaagagtgg ccggagcaag ccagactcca gaattgagaa
2521 agtgactgac cacctggaag ccctcattga tccatttgac ctggacgttt tcacgccaca
2581 cctcaacagc aaccttcatc gcctggtgca gcgaacttct gttctgtttg gattggtgac
2641 tggtacagag aatcagctcg ccccccggag cagtacgttc aactcccaag aaccccataa
2701 catcctgcca ctggcatcca gtcagatcag gtttggactt ctcccactga gcatgacaag
2761 cactcgaaag gctaaatcaa ccagaaacat cgaaacaaaa gctcaggttg tccccccggc
2821 acgctccaca gctggtgacc cgacagttcc tggctccttg ttcagacagc ttgtcagtga
2881 agaagacaac acgtctgcac cttcattatt caaacttggc tggctctcta gtatgactaa
2941 gtaacatggc aacacatctg tctctcccta aataaatact accacattat ttcttctaaa
3001 aaaaaaaaaa aaaaaaaaaa aa
//