LOCUS BC021971 1192 bp mRNA linear HUM 30-SEP-2003
DEFINITION Homo sapiens casein kinase 1, alpha 1, mRNA (cDNA clone
IMAGE:3936929), partial cds.
ACCESSION BC021971
VERSION BC021971.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1192)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1192)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (22-JAN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC021971.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 25 Row: d Column: 17
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 19923484.
FEATURES Location/Qualifiers
source 1..1192
/db_xref="H-InvDB:HIT000090491"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3936929"
/tissue_type="Lung, small cell carcinoma"
/clone_lib="NIH_MGC_7"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..>1192
/gene="CSNK1A1"
/gene_synonym="CK1"
/gene_synonym="HLCDGP1"
/gene_synonym="PRO2975"
/db_xref="GeneID:1452"
/db_xref="MIM:600505"
CDS 408..>1192
/gene="CSNK1A1"
/gene_synonym="CK1"
/gene_synonym="HLCDGP1"
/gene_synonym="PRO2975"
/codon_start=1
/product="CSNK1A1 protein"
/protein_id="AAH21971.1"
/db_xref="GeneID:1452"
/db_xref="MIM:600505"
/translation="MASSSGSKAEFIVGGKYKLVRKIGSGSFGDIYLAINITNGEEVA
VKLESQKARHPQLLYESKLYKILQGGVGIPHIRWYGQEKDYNVLVMDLLGPSLEDLFN
FCSRRFTMKTVLMLADQMISRIEYVHTKNFIHRDIKPDNFLMGIGRHCNKCLESPVGK
RKRSMTVSTSQDPSFSGLNQLFLIDFGLAKKYRDNRTRQHIPYREDKNLTGTARYASI
NAHLGIEQSRRDDMESLGYVLMYFNRTSLPWQGLKAATKKKKK"
misc_feature 456..1160
/gene="CSNK1A1"
/gene_synonym="CK1"
/gene_synonym="HLCDGP1"
/gene_synonym="PRO2975"
/note="pkinase; Region: Protein kinase domain"
/db_xref="CDD:pfam00069"
BASE COUNT 321 a 299 c 311 g 261 t
ORIGIN
1 ggagtaacaa gatggcgtcg tccgcggagt gacaggggtc cctctgggcc ggagccggcg
61 gcagtggtgg cagcggtatc gccgccctag ctcaccgcgc cccttttcca gcccgcgacg
121 tcgccgcgca agcgaggcag cggcggccgc cgagaaacaa gtggcccagc ctggtaaccg
181 ccgagaagcc cttcacaaac tgcggcctgg caaaaagaaa cctgactgag cggcggtgat
241 caggttcccc tctgctgatt ctgggccccg aaccccggta aaggcctccg tgttccgttt
301 cctgccgccc tcctccgtag ccttgcctag tgtaggagcc ccgaggcctc cgtcctcttc
361 ccagaggtgt cggggcttgg ccccagcctc catcttcgtc tctcaggatg gcgagtagca
421 gcggctccaa ggctgaattc attgtcggag ggaaatataa actggtacgg aagatcgggt
481 ctggctcctt cggggacatc tatttggcga tcaacatcac caacggcgag gaagtggcag
541 tgaagctaga atctcagaag gccaggcatc cccagttgct gtacgagagc aagctctata
601 agattcttca aggtggggtt ggcatccccc acatacggtg gtatggtcag gaaaaagact
661 acaatgtact agtcatggat cttctgggac ctagcctcga agacctcttc aatttctgtt
721 caagaaggtt cacaatgaaa actgtactta tgttagctga ccagatgatc agtagaattg
781 aatatgtgca tacaaagaat tttatacaca gagacattaa accagataac ttcctaatgg
841 gtattgggcg tcactgtaat aagtgtttag aatctccagt ggggaagagg aaaagaagca
901 tgactgttag tacttctcag gacccatctt tctcaggatt aaaccagtta ttccttattg
961 attttggttt ggccaaaaag tacagagaca acaggacaag gcaacacata ccatacagag
1021 aagataaaaa cctcactggc actgcccgat atgctagcat caatgcacat cttggtattg
1081 agcagagtcg ccgagatgac atggaatcat taggatatgt tttgatgtat tttaatagaa
1141 ccagcctgcc atggcaaggg ctaaaggctg caacaaaaaa aaaaaaaaaa aa
//