LOCUS BC021965 2009 bp mRNA linear HUM 19-JUN-2006
DEFINITION Homo sapiens UDP-GlcNAc:betaGal
beta-1,3-N-acetylglucosaminyltransferase 1, mRNA (cDNA clone
MGC:1271 IMAGE:2988041), complete cds.
ACCESSION BC021965
VERSION BC021965.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2009)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2009)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (22-JAN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC021965.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 3 Row: h Column: 9
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 5802983.
FEATURES Location/Qualifiers
source 1..2009
/db_xref="H-InvDB:HIT000039317"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:1271 IMAGE:2988041"
/tissue_type="Colon, adenocarcinoma"
/clone_lib="NIH_MGC_15"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2009
/gene="B3GNT1"
/gene_synonym="B3GN-T1"
/gene_synonym="BETA3GNTI"
/gene_synonym="iGAT"
/gene_synonym="iGNT"
/db_xref="GeneID:11041"
/db_xref="HGNC:HGNC:15685"
/db_xref="MIM:605517"
CDS 70..1317
/gene="B3GNT1"
/gene_synonym="B3GN-T1"
/gene_synonym="BETA3GNTI"
/gene_synonym="iGAT"
/gene_synonym="iGNT"
/codon_start=1
/product="UDP-GlcNAc:betaGal
beta-1,3-N-acetylglucosaminyltransferase 1"
/protein_id="AAH21965.1"
/db_xref="GeneID:11041"
/db_xref="HGNC:HGNC:15685"
/db_xref="MIM:605517"
/translation="MQMSYAIRCAFYQLLLAALMLVAMLQLLYLSLLSGLHGQEEQDQ
YFEFFPPSPRSVDQVKAQLRTALASGGVLDASGDYRVYRGLLKTTMDPNDVILATHAS
VDNLLHLSGLLERWEGPLSVSVFAATKEEAQLATVLAYALSSHCPDMRARVAMHLVCP
SRYEAAVPDPREPGEFALLRSCQEVFDKLARVAQPGINYALGTNVSYPNNLLRNLARE
GANYALVIDVDMVPSEGLWRGLREMLDQSNQWGGTALVVPAFEIRRARRMPMNKNELV
QLYQVGEVRPFYYGLCTPCQAPTNYSRWVNLPEESLLRPAYVVPWQDPWEPFYVAGGK
VPTFDERFRQYGFNRISQACELHVAGFDFEVLNEGFLVHKGFKEALKFHPQKEAENQH
NKILYRQFKQELKAKYPNSPRRC"
BASE COUNT 431 a 543 c 593 g 442 t
ORIGIN
1 cgggcttgcg gccgctggcg tagtctgtgg ccgggtggtc gttgctgcgc gccccgagcc
61 ccgagagcca tgcagatgtc ctacgccatc cggtgcgcct tctaccagct gctgctggcc
121 gcgctcatgc tggtggcgat gctgcagctg ctctacctgt cgctgctgtc cggactgcac
181 gggcaggagg agcaagacca atattttgag ttctttcccc cgtccccacg gtccgtggac
241 caggtcaagg cgcagctccg caccgcgctg gcctctggag gcgtcctgga cgctagcggc
301 gattaccgcg tctacagggg cctgctgaag accaccatgg accccaacga tgtgatcctg
361 gccacgcacg ccagcgtgga caacctgctg cacctgtcgg gtctgctgga gcgctgggag
421 ggcccgctgt ccgtgtcggt gttcgcggcc accaaggagg aggcgcagct ggccacggtg
481 ctggcctacg cgctgagcag ccactgcccc gacatgcgcg ccagggtcgc catgcacctc
541 gtgtgcccct cgcgttacga ggcagccgtg cccgaccccc gggagccggg ggagtttgcc
601 ctgctgcggt cctgccagga ggtctttgac aagctagcca gggtggccca gcccgggatt
661 aattatgcgc tgggcaccaa tgtctcctac cccaataacc tgctgaggaa tctggctcgt
721 gagggggcca actatgccct ggtgatcgat gtggacatgg tgcccagcga ggggctgtgg
781 agaggcctgc gggaaatgct ggatcagagc aaccagtggg gaggcaccgc gctggtggtg
841 cctgccttcg aaatccgaag agcccgccgc atgcccatga acaaaaacga gctggtgcag
901 ctctaccagg ttggcgaggt gcggcccttc tattatgggt tgtgcacccc ctgccaggca
961 cccaccaact attcccgctg ggtcaacctg ccggaagaga gcttgctgcg gcccgcctac
1021 gtggtacctt ggcaggaccc ctgggagcca ttctacgtgg caggaggcaa ggtgcccacc
1081 ttcgacgagc gctttcggca gtacggcttc aaccgaatca gccaggcctg cgagctgcat
1141 gtggcggggt ttgattttga ggtcctgaac gaaggtttct tggttcataa gggcttcaaa
1201 gaagcgttga agttccatcc ccaaaaggag gctgaaaatc agcacaataa gatcctatat
1261 cgccagttca aacaggagtt gaaggccaag taccccaact ctccccgacg ctgctgagcc
1321 cttccctccc ctaatctgag aagtcagcct cttggctcct caggccacca tttaggcctg
1381 actggggtaa gaaatgtcgc tccactttac agaggtagct gtggtgttga aacactggac
1441 ttggatatgg ggtgctggga tcgattccta gctttaccac taactagctg tgtggccttg
1501 agtaaatccc gttacctctc tgagcctcgg ttaccctgtc tgtaaaaagg gaggtgagaa
1561 tacctacctc acggaactgt tgggaggctc agatgagatg ctatatgtga aaacattctg
1621 taagcttcgt acaaatgtga agtattaata ttatcgcagt attattgttg ttattattat
1681 tgttattatt aacaatcttg ggtgggtagt aggagagcaa aaagtatgaa tgggatggag
1741 ctaagaagtc tgaatactta atgaaatgga ctttttggaa agaaatcaga tgaaggcata
1801 aaatttagtt cttagctctt gaacagaagc ctaaaattcc tggttctctc agggcttcgc
1861 cttcaagggt tctggaggag ggaagggtct gcaggttcca tgggtgacag cctgagatct
1921 gtcccttcaa cgggctgggc tgggtatgtg cctaccgatg acaatgtgta aataaatgcg
1981 tgttcacacc caaaaaaaaa aaaaaaaaa
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