LOCUS BC021908 2049 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens zinc finger, DHHC-type containing 1, mRNA (cDNA clone
MGC:13113 IMAGE:4053374), complete cds.
ACCESSION BC021908
VERSION BC021908.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2049)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2049)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (22-JAN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 18 Row: p Column: 23
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 24307962.
FEATURES Location/Qualifiers
source 1..2049
/db_xref="H-InvDB:HIT000039302"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:13113 IMAGE:4053374"
/tissue_type="Uterus, leiomyosarcoma"
/clone_lib="NIH_MGC_46"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2049
/gene="ZDHHC1"
/gene_synonym="HSU90653"
/gene_synonym="ZNF377"
/db_xref="GeneID:29800"
/db_xref="HGNC:HGNC:17916"
CDS 331..1788
/gene="ZDHHC1"
/gene_synonym="HSU90653"
/gene_synonym="ZNF377"
/codon_start=1
/product="zinc finger, DHHC-type containing 1"
/protein_id="AAH21908.1"
/db_xref="GeneID:29800"
/db_xref="HGNC:HGNC:17916"
/translation="MYKMNICNKPSNKTAPEKSVWTAPAQPSGPSPELQGQRSRRNGW
SWPPHPLQIVAWLLYLFFAVIGFGILVPLLPHHWVPAGYACMGAIFAGHLVVHLTAVS
IDPADANVRDKSYAGPLPIFNRSQHAHVIEDLHCNLCNVDVSARSKHCSACNKCVCGF
DHHCKWLNNCVGERNYRLFLHSVASALLGVLLLVLVATYVFVEFFVNPMRLRTNRHFE
VLKNHTDVWFVFLPAAPVETQAPAILALAALLILLGLLSTALLGHLLCFHIYLMWHKL
TTYEYIVQHRPPQEAKGVHRELESCPPKMRPIQEMEFYMRTFRHMRPEPPGQAGPAAV
NAKHSRPASPDPTPGRRDCAGPPVQVEWDRKKPLPWRSPLLLLAMWGPQAPPCLCRKR
GRGACIKCERLRPRIRRRGLGPPAAAPARRRIPRTPALCTPLALPAPTTRRRQSPWTR
FQWRRRAWAAPLWPPRGAGADSPRWRGRRVRPPFS"
BASE COUNT 353 a 705 c 621 g 370 t
ORIGIN
1 gccggacgag gcccagccag tctgggtctg gcctggccgc ccctccagcc tgctggagcc
61 ggagccggag ccggagccgg agccagagcc agagctcgag gactcaccgg cccagtctcc
121 gtccgggatg gggccccgct cccgggcgcg ttgccgccca gtcccgggga ccgtccctac
181 cgcgagggtc tgaggcgcgg ctgccccggg gagggtggaa ggccaggcgt ggggcccgaa
241 cctctggctg actttggcag ggcccatctg gcacggcctc cgcggcgcgc agctgttttc
301 aagtcagcaa acatttactg aggatctact atgtacaaga tgaacatctg caacaagccc
361 tccaacaaga cggcccctga gaagagtgtg tggacggcac cggcacagcc cagcggaccc
421 tcccctgagc tgcagggcca gcgatcccgc cggaatgggt ggagctggcc ccctcacccg
481 ctccagattg tggcctggct gctgtacctc ttctttgctg tgatcggctt tgggatcctt
541 gttcccctcc tgcctcacca ctgggtgccc gctggctacg cttgcatggg cgccatcttt
601 gctggccacc ttgtggtgca cctgaccgcc gtctccatcg atccagcaga tgccaacgtg
661 cgggacaaga gctatgcggg gcccctgccc atcttcaacc gaagccagca cgcacatgtc
721 attgaagacc tgcactgcaa cttgtgcaac gtggatgtga gcgctcgctc caagcactgc
781 agcgcctgca acaagtgcgt gtgcggtttc gaccaccact gcaagtggct caacaactgt
841 gtgggcgagc ggaactaccg gctctttcta cacagtgttg catccgcttt actgggcgtc
901 ctgctcctgg tgctggtggc cacatatgtc ttcgtggagt tctttgtcaa ccccatgcgt
961 ctgcgcacca accgacactt tgaagtcctg aagaatcaca cggatgtgtg gttcgtgttc
1021 ctgcctgccg cccccgtgga gacccaggcc cctgccatcc tggccctggc cgccctgctc
1081 atccttctgg gcctcctgtc cacagccctc ctggggcacc tgctctgctt ccacatttat
1141 ctcatgtggc acaagctcac cacctatgag tacatcgtgc agcaccgccc accacaggag
1201 gccaaggggg ttcacaggga gctcgagtca tgtcctccca agatgcggcc cattcaggag
1261 atggagttct acatgcggac cttcagacat atgcgcccag agccccctgg ccaggccggg
1321 ccagcagcag tgaatgccaa acactctcgc cctgcctccc cggatccgac cccaggtagg
1381 agggactgtg ctgggcctcc ggtccaggtg gagtgggata gaaagaagcc tctaccctgg
1441 cgctcgcctc tgcttctttt ggcgatgtgg ggccctcagg ctcccccgtg tctctgcaga
1501 aaaagaggaa gaggcgcgtg tataaagtgc gaacgtctga gacctcggat ccggcgtcgg
1561 ggcctagggc ccccagccgc cgctccagct cgtcgacgga ttccgcggac gccagccctg
1621 tgcacgccgc tggccctgcc ggcgcctacc actcggcgtc ggcagagtcc gtggacgaga
1681 ttccagtggc gcagacgcgc ctgggcagcg ccgctctggc cgccccgcgg ggccggggcc
1741 gacagcccac gctggcgcgg caggcgcgtg cgcccgccgt tttcgtgagc ccgagcagcg
1801 gcgagcccag ggcgccgggc ggccgggagg ctggtctggc ttagctgggc cgagaggccg
1861 gagggccgag ttagagcggc cggcctgact ctctatgcaa caccccatcc ttgccgcacc
1921 gagtgcactt taggggcccc tacggccggc gggatcggcc tccctccccc acgactcagc
1981 aatacccgcc ccaccggctg tgatgctcca ataaactttt ttatgcttta aaaaaaaaaa
2041 aaaaaaaaa
//