LOCUS BC021892 1733 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens scavenger receptor class B, member 2, mRNA (cDNA clone
MGC:9392 IMAGE:3872778), complete cds.
ACCESSION BC021892
VERSION BC021892.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1733)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1733)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (18-JAN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 13 Row: l Column: 1.
FEATURES Location/Qualifiers
source 1..1733
/db_xref="H-InvDB:HIT000039296"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:9392 IMAGE:3872778"
/tissue_type="Eye, retinoblastoma"
/clone_lib="NIH_MGC_67"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1733
/gene="SCARB2"
/gene_synonym="HLGP85"
/gene_synonym="LIMPII"
/gene_synonym="SR-BII"
/db_xref="GeneID:950"
/db_xref="HGNC:HGNC:1665"
/db_xref="MIM:602257"
CDS 23..1459
/gene="SCARB2"
/gene_synonym="HLGP85"
/gene_synonym="LIMPII"
/gene_synonym="SR-BII"
/codon_start=1
/product="scavenger receptor class B, member 2"
/protein_id="AAH21892.1"
/db_xref="GeneID:950"
/db_xref="HGNC:HGNC:1665"
/db_xref="MIM:602257"
/translation="MGRCCFYTAGTLSLLLLVTSVTLLVARVFQKAVDQSIEKKIVLR
NGTEAFDSWEKPPLPVYTQFYFFNVTNPEEILRGETPRVEEVGPYTYRELRNKANIQF
GDNGTTISAVSNKAYVFERDQSVGDPKIDLIRTLNIPVLTVIEWSQVHFLREIIEAML
KAYQQKLFVTHTVDELLWGYKDEILSLIHVFRPDISPYFGLFYEKNGTNDGDYVFLTG
EDSYLNFTKIVEWNGKTSLDWWITDKCNMINGTDGDSFHPLITKDEVLYVFPSDFCRS
VYITFSDYESVQGLPAFRYKVPAEILANTSDNAGFCIPEGNCLGSGVLNVSICKNGAP
IIMSFPHFYQADERFVSAIEGMHPNQEDHETFVDINPLTGIILKAAKRFQINIYVKKL
DDFVETGDIRTMVFPVMYLNESVHIDKETASRLKSMINTTLIITNIPYIIMALGVFFG
LVFTWLACKGQGSMDEGTADERAPLIRT"
BASE COUNT 499 a 362 c 411 g 461 t
ORIGIN
1 cggcccgtga gcggcgcaca gaatgggccg atgctgcttc tacacggcgg ggacgttgtc
61 cctgctcctg ctggtgacca gcgtcacgct gctggtggcc cgggtcttcc agaaggctgt
121 agaccagagt atcgagaaga aaattgtgtt aaggaatggt actgaggcat ttgactcctg
181 ggagaagccc cctctgcctg tgtatactca gttctatttc ttcaatgtca ccaatccaga
241 ggagatcctc agaggggaga cccctcgggt ggaagaagtg gggccataca cctacaggga
301 actcagaaac aaagcaaata ttcaatttgg agataatgga acaacaatat ctgctgttag
361 caacaaggcc tatgtttttg aacgagacca atctgttgga gaccctaaaa ttgacttaat
421 tagaacatta aatattcctg tattgactgt catagagtgg tcccaggtgc acttcctcag
481 ggagatcatc gaggccatgt tgaaagccta tcagcagaag ctctttgtga ctcacacagt
541 tgacgaattg ctctggggct acaaagatga aatcttgtcc cttatccatg ttttcaggcc
601 cgatatctct ccctattttg gcctattcta tgagaaaaat gggactaatg atggagacta
661 tgtttttcta actggagaag acagttacct taactttaca aaaattgtgg aatggaatgg
721 gaaaacgtca cttgactggt ggataacaga caagtgcaat atgattaatg gaacagatgg
781 agattctttt cacccactaa taaccaaaga tgaggtcctt tatgtcttcc catctgactt
841 ttgcaggtca gtgtatatta ctttcagtga ctatgagagt gtacagggac tgcctgcctt
901 tcggtataaa gttcctgcag aaatattagc caatacgtca gacaatgccg gcttctgtat
961 acctgaggga aactgcctgg gctcaggagt tctgaatgtc agcatctgca agaatggtgc
1021 acccatcatt atgtctttcc cacactttta ccaagcagat gagaggtttg tttctgccat
1081 agaaggcatg cacccaaatc aggaagacca tgagacattt gtggacatta atcctttgac
1141 tggaataatc ctaaaagcag ccaagaggtt ccaaatcaac atttatgtca aaaaattaga
1201 tgactttgtt gaaacgggag acattagaac catggttttc ccagtgatgt acctcaatga
1261 gagtgttcac attgataaag agacggcgag tcgactgaag tctatgatta acactacttt
1321 gatcatcacc aacataccct acatcatcat ggcgctgggt gtgttctttg gtttggtttt
1381 tacctggctt gcatgcaaag gacagggatc catggatgag ggaacagcgg atgaaagagc
1441 acccctcatt cgaacctaaa cattgccttt gcttggtgaa gaaactgtgt gagctgtcct
1501 gacctggacg atgacgtggg gaaaccctcc acctccttgc aggcttgttg cctgttgaaa
1561 gaaggaaaaa gacacggcgc tggcaagtga taggaacatt ctggccagag gttaaagagc
1621 aggctgacat ggctggccat taagctttat aaaatcatgt gggctctgaa attgttcttt
1681 tatgtgtcta gcaagtattt aataaaccct tgtatagtaa aaaaaaaaaa aaa
//