LOCUS BC021742 800 bp mRNA linear HUM 01-SEP-2006
DEFINITION Homo sapiens chromosome 2 open reading frame 40, mRNA (cDNA clone
MGC:33676 IMAGE:5260075), complete cds.
ACCESSION BC021742
VERSION BC021742.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 800)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 800)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (14-JAN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 47 Row: e Column: 22
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 14165275.
FEATURES Location/Qualifiers
source 1..800
/db_xref="H-InvDB:HIT000039284"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:33676 IMAGE:5260075"
/tissue_type="Brain, hippocampus"
/clone_lib="NIH_MGC_95"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..800
/gene="C2orf40"
/gene_synonym="ECRG4"
/db_xref="GeneID:84417"
/db_xref="HGNC:HGNC:24642"
CDS 113..559
/gene="C2orf40"
/gene_synonym="ECRG4"
/codon_start=1
/product="C2orf40 protein"
/protein_id="AAH21742.1"
/db_xref="GeneID:84417"
/db_xref="HGNC:HGNC:24642"
/translation="MAASPARPAVLALTGLALLLLLCWGPGGISGNKLKLMLQKREAP
VPTKTKVAVDENKAKEFLGSLKRQKRQLWDRTRPEVQQWYQQFLYMGFDEAKFEDDIT
YWLNRDRNGHEYYGDYYQRHYDEDSAIGPRSPYGFRHGASVNYDDY"
BASE COUNT 212 a 222 c 183 g 183 t
ORIGIN
1 agcgggatag cccgcggccg cgcctgcccg ctcgcacccc tctcccgcgc ccggttctcc
61 ctcgcagcac ctcgaagtgc gcccctcgcc ctcctgctcg cgccccgccg ccatggctgc
121 ctcccccgcg cggcctgctg tcctggccct gaccgggctg gcgctgctcc tgctcctgtg
181 ctggggccca ggtggcataa gtggaaataa actcaagctg atgcttcaaa aacgagaagc
241 acctgttcca actaagacta aagtggccgt tgatgagaat aaagccaaag aattccttgg
301 cagcctgaag cgccagaagc ggcagctgtg ggaccggact cggcccgagg tgcagcagtg
361 gtaccagcag tttctctaca tgggctttga cgaagcgaaa tttgaagatg acatcaccta
421 ttggcttaac agagatcgaa atggacatga atactatggc gattactacc aacgtcacta
481 tgatgaagac tctgcaattg gtccccggag cccctacggc tttaggcatg gagccagcgt
541 caactacgat gactactaac catgacttgc cacacgctgt acaagaagca aatagcgatt
601 ctcttcatgt atctcctaat gccttacact acttggtttc tgatttgctc tatttcagca
661 gatcttttct acctactttg tgtgatcaaa aaagaagagt taaaacaaca catgtaaatg
721 ccttttgata tttcatggga atgcctctca tttaaaaata gaaataaagc attttgttaa
781 aaagaaaaaa aaaaaaaaaa
//