LOCUS BC021730 790 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens lysozyme-like 1, mRNA (cDNA clone MGC:33408
IMAGE:4825273), complete cds.
ACCESSION BC021730
VERSION BC021730.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 790)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 790)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (14-JAN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Sep 16, 2003 this sequence version replaced BC021730.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 46 Row: n Column: 20
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 34098967.
FEATURES Location/Qualifiers
source 1..790
/db_xref="H-InvDB:HIT000039277"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:33408 IMAGE:4825273"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..790
/gene="LYZL1"
/gene_synonym="bA534G20.1"
/gene_synonym="KAAG648"
/gene_synonym="LYC2"
/gene_synonym="MGC33408"
/gene_synonym="PRO1278"
/db_xref="GeneID:84569"
/db_xref="HGNC:HGNC:30502"
CDS 24..608
/gene="LYZL1"
/gene_synonym="bA534G20.1"
/gene_synonym="KAAG648"
/gene_synonym="LYC2"
/gene_synonym="MGC33408"
/gene_synonym="PRO1278"
/codon_start=1
/product="lysozyme-like 1"
/protein_id="AAH21730.1"
/db_xref="GeneID:84569"
/db_xref="HGNC:HGNC:30502"
/translation="MQDAPLSCLSPTRWSSVSSADSTEKSASGAGTRNLPFQFCLRQA
LRMKAAGILTLIGCLVTGAESKIYTRCKLAKIFSRAGLDNYWGFSLGNWICMAYYESG
YNTTAPTVLDDGSIDYGIFQINSFAWCRRGKLKENNHCHVACSALITDDLTDAIICAR
KIVKETQGMNYWQGWKKHCEGRDLSEWKKGCEVS"
BASE COUNT 220 a 190 c 199 g 181 t
ORIGIN
1 agaatcagac atggcttcag gggatgcagg acgctcccct gagctgcctg tcaccgacta
61 ggtggagcag tgtttcttcc gcagactcaa ctgagaagtc agcctctggg gcaggcacca
121 ggaatctgcc ttttcagttc tgtctccggc aggctttgag gatgaaggct gcgggcattc
181 tgaccctcat tggctgcctg gtcacaggcg ccgagtccaa aatctacact cgttgcaaac
241 tggcaaaaat attctcgagg gctggcctgg acaattactg gggcttcagc cttggaaact
301 ggatctgcat ggcatattat gagagcggct acaacaccac agccccgacg gtcctggatg
361 acggcagcat cgactatggc atcttccaga tcaacagctt cgcgtggtgc agacgcggaa
421 agctgaagga gaacaaccac tgccatgtcg cctgctcagc cttgatcact gatgacctca
481 cagatgcaat tatctgtgcc aggaaaattg ttaaagagac acaaggaatg aactattggc
541 aaggctggaa gaaacattgt gagggcagag acctgtccga gtggaaaaaa ggctgtgagg
601 tttcctaaac tggaactgga cccaggatgc tttgcagcaa cgccctagga tttgcagtga
661 atgtccaaat gcctgtgtca tcttgtcccg tttcctccca atattccttc tcaaacttgg
721 agagggaaaa ttaagctata cttttaagaa aataaatatt tccatttaaa tgtcaaaaaa
781 aaaaaaaaaa
//