LOCUS BC021725 1077 bp mRNA linear HUM 21-JUL-2006
DEFINITION Homo sapiens phosphatidylinositol glycan anchor biosynthesis, class
F, mRNA (cDNA clone MGC:33136 IMAGE:5269689), complete cds.
ACCESSION BC021725
VERSION BC021725.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1077)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1077)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (14-JAN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 47 Row: p Column: 21
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 27894290.
FEATURES Location/Qualifiers
source 1..1077
/db_xref="H-InvDB:HIT000039272"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:33136 IMAGE:5269689"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..1077
/gene="PIGF"
/gene_synonym="MGC32646"
/gene_synonym="MGC33136"
/db_xref="GeneID:5281"
/db_xref="HGNC:HGNC:8962"
/db_xref="MIM:600153"
CDS 105..725
/gene="PIGF"
/gene_synonym="MGC32646"
/gene_synonym="MGC33136"
/codon_start=1
/product="phosphatidylinositol glycan anchor biosynthesis,
class F"
/protein_id="AAH21725.1"
/db_xref="GeneID:5281"
/db_xref="HGNC:HGNC:8962"
/db_xref="MIM:600153"
/translation="MKDNDIKRLLYTHLLCIFSIILSVFIPSLFLENFSILETHLTWL
CICSGFVTAVNLVLYLVVKPNTSSKRSSLSHKVTGFLKCCIYFLMSCFSFHVIFVLYG
APLIELALETFLFAVILSTFTTVPCLCLLGPNLKAWLRVFSRNGVTSIWENSLQITTI
SSFVGAWLGALPIPLDWERPWQMTVERKRSTYRSLHVPCRGLGTVK"
BASE COUNT 307 a 208 c 227 g 335 t
ORIGIN
1 agcgggtggg cctgggccgc ccgtcgtacc tgatggtagg aggcagtagt tccccgcttc
61 ccttccgcgg gagggagagt tagctagcca tccaagaaaa caccatgaaa gataacgata
121 tcaagagact actgtatacc catcttttat gcatattttc aattatccta agtgtcttca
181 ttccatcact cttcttggag aacttctcaa tattggaaac acacttgaca tggttgtgca
241 tctgttctgg ttttgtaact gctgtcaatc tagtactata tttagtagtg aaaccaaata
301 catcctctaa aagaagttca ttatcacaca aggtaactgg atttttgaaa tgctgtatct
361 actttcttat gtcttgtttc tcctttcatg taatttttgt tctgtatgga gcaccactga
421 tagagttggc gttggaaaca tttttatttg cagttatttt gtctactttt actactgtgc
481 cttgcttatg tttgttagga ccaaacctca aagcatggct aagagtgttc agtagaaatg
541 gagttacatc catatgggag aatagtctcc agatcactac aatttctagc tttgtaggag
601 catggcttgg agcacttcct attccactgg attgggaaag accatggcag atgacagtag
661 aaagaaaacg tagcacttat agatctctcc atgtaccctg cagggggctt ggtactgtga
721 aatgagtaac ttaatcctga caaccgtagt gcaaggtatg gcccatctcc tgtacgcttg
781 gagcgacctt tggctacgtg gctggccttg ttatttcacc actctggata tactggaata
841 gaaagcaact tacatacaag aacaattaac tggagcaaag ggagatattt ctttgtgcag
901 attctgtaag ggctgggcag aaatgtgtat ggtcaaagcc aagcagttcc atttacagct
961 ctgtttttta cgtagttaca acatgatgtg attgtagctt tttaaactat gaaacccctg
1021 agagattgta ccttctagtt gaaataaagt atttataata gaaaaaaaaa aaaaaaa
//