LOCUS BC021718 983 bp mRNA linear HUM 01-SEP-2006 DEFINITION Homo sapiens chromosome 16 open reading frame 78, mRNA (cDNA clone MGC:32905 IMAGE:5265370), complete cds. ACCESSION BC021718 VERSION BC021718.2 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 983) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 983) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (14-JAN-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Sep 16, 2003 this sequence version replaced BC021718.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Miklos Palkovits, M.D., Ph.D. cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki Toshiyuki and Piero Carninci (RIKEN) cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Institute for Systems Biology http://www.systemsbiology.org contact: amadan@systemsbiology.org Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 47 Row: i Column: 20 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 25188200. FEATURES Location/Qualifiers source 1..983 /db_xref="H-InvDB:HIT000039267" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:32905 IMAGE:5265370" /tissue_type="Testis" /clone_lib="NIH_MGC_97" /lab_host="DH10B" /note="Vector: pBluescriptR" gene 1..983 /gene="C16orf78" /gene_synonym="MGC33367" /db_xref="GeneID:123970" /db_xref="HGNC:HGNC:28479" CDS 44..841 /gene="C16orf78" /gene_synonym="MGC33367" /codon_start=1 /product="chromosome 16 open reading frame 78" /protein_id="AAH21718.1" /db_xref="GeneID:123970" /db_xref="HGNC:HGNC:28479" /translation="MSEQQMDLKDLMPTKRKYMWKTAEDRRMSDLTCVLEWLERRQGK KKQAPEKQKPKVVTVLKRNKKKEEKKGKGLMTARGGNRRDTETSQQALGKRFRKDAAS YRSLYGVEQKGKHLSMVPGSYIKDGPKKSDTDIKDAVDPESTQRPNPFRRQSIVLDPM LQEGTFNSQRATFIRDWSNKMPDMAYERKLKSLMEKSTEPKMETMRMLKPEEVLSCRY LRLSKENIRTLLKLCKDAGMNVDIHPHMVEEDIDAKKVFTGIPSMAL" BASE COUNT 317 a 250 c 249 g 167 t ORIGIN 1 agtgtcagcc acctcccacc caagccacta gcaagactcc acaatgtcag agcaacaaat 61 ggacctgaag gatttaatgc ccacaaagag gaaatacatg tggaagactg ctgaagatag 121 gcgcatgtct gacctcacct gtgtgctgga gtggctggag cggaggcagg ggaagaagaa 181 acaagctccc gagaagcaaa agcccaaagt ggtgacagtc cttaaacgaa ataagaagaa 241 ggaagagaag aaaggcaaag gcctcatgac agcacgggga gggaaccgca gggacacgga 301 gacttcccag caggccttag gaaagagatt caggaaggac gccgcctcct accgaagcct 361 ctatggagtg gagcaaaagg ggaaacacct cagcatggtc cctggcagct acatcaagga 421 tggccccaag aaatctgata cagacatcaa ggatgcagtc gacccagagt ccactcagcg 481 gccaaaccca ttccgtcgac aaagcattgt cttagatccc atgttacagg agggtacctt 541 taacagccag agggcaacct tcataagaga ctggtccaac aagatgcctg acatggctta 601 cgaacgcaag ctaaagagcc tcatggagaa aagcaccgaa cctaagatgg aaaccatgag 661 gatgttgaag ccagaggagg tgctgagctg ccgatacctg aggttatcca aggagaacat 721 tcggaccttg ctcaagttgt gcaaggatgc aggaatgaat gtggatatcc acccccacat 781 ggtcgaagag gacatagatg ctaaaaaggt gttcaccgga atacccagca tggccctcta 841 aatagctcct ctcgccacca ccttcaggct ccttctgtca tgggaccctt cacctccaga 901 tgccatcctc tggcacacta caagtggtcc ttccaactta gtgcatccct ttagaaagta 961 agcaatcaga aaaaaaaaaa aaa //