LOCUS BC021709 1653 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens sarcoglycan, epsilon, mRNA (cDNA clone MGC:26495
IMAGE:4822278), complete cds.
ACCESSION BC021709
VERSION BC021709.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1653)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1653)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (14-JAN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 25, 2003 this sequence version replaced BC021709.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 33 Row: d Column: 23
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 10835046.
FEATURES Location/Qualifiers
source 1..1653
/db_xref="H-InvDB:HIT000039259"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:26495 IMAGE:4822278"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..1653
/gene="SGCE"
/gene_synonym="ESG"
/db_xref="GeneID:8910"
/db_xref="HGNC:HGNC:10808"
/db_xref="MIM:604149"
CDS 52..1365
/gene="SGCE"
/gene_synonym="ESG"
/codon_start=1
/product="sarcoglycan, epsilon"
/protein_id="AAH21709.1"
/db_xref="GeneID:8910"
/db_xref="HGNC:HGNC:10808"
/db_xref="MIM:604149"
/translation="MQLPRWWELGDPCAWTGQGRGTRRMSPATTGTFLLTVYSIFSKV
HSDRSVYPSAGVLFVHVLEREYFKGEFPPYPKPGEISNDPITFNTNLMGYPDRPGWLR
YIQRTPYSDGVLYGSPTAENVGKPTIIEITAYNRRTFETARHNLIINIMSAEDFPLPY
QAEFFIKNMNVEEMLASEVLGDFLGAVKNVWQPERLNAINITSALDRGGRVPLPINDL
KEGVYVMVGADVPFSSCLREVENPQNQLRCSQEMEPVITCDKKFRTQFYIDWCKISLV
DKTKQVSTYQEVIRGEGILPDGGEYKPPSDSLKSRDYYTDFLITLAVPSAVALVLFLI
LAYIMCCRREGVEKRNMQTPDIQLVHHSAIQKSTKELRDMSKNREIAWPLSTLPVFHP
VTGEIIHPLHTDNYDSTNMPLMQTQQNLPHQTQIPQQQTTGKWYP"
BASE COUNT 518 a 335 c 365 g 435 t
ORIGIN
1 aagagggagg ggaggggaga atcgaggacg gacggcctag ccaggccaag aatgcaattg
61 ccccggtggt gggagctggg agacccctgt gcttggacgg gacagggtcg ggggacacgc
121 aggatgagcc ccgcgaccac tggcacattc ttgctgacag tgtacagtat tttctccaag
181 gtacactccg atcggagtgt atacccatca gcaggtgtcc tctttgttca tgttttggaa
241 agagaatatt ttaaggggga atttccacct tacccaaaac ctggcgagat tagtaatgat
301 cccataacat ttaatacaaa tttaatgggt tacccagacc gacctggatg gcttcgatat
361 atccaaagga caccatatag tgatggagtc ctatatgggt ccccaacagc tgaaaatgtg
421 gggaagccaa caatcattga gataactgcc tacaacaggc gcacctttga gactgcaagg
481 cataatttga taattaatat aatgtctgca gaagacttcc cgttgccata tcaagcagaa
541 ttcttcatta agaatatgaa tgtagaagaa atgttggcca gtgaggttct tggagacttt
601 cttggcgcag tgaaaaatgt gtggcagcca gagcgcctga acgccataaa catcacatcg
661 gccctagaca ggggtggcag ggtgccactt cccattaatg acctgaagga gggcgtttat
721 gtcatggttg gtgcagatgt cccgttttct tcttgtttac gagaagttga aaatccacag
781 aatcaattga gatgtagtca agaaatggag cctgtaataa catgtgataa aaaatttcgt
841 actcaatttt acattgactg gtgcaaaatt tcattggttg ataaaacaaa gcaagtgtcc
901 acctatcagg aagtgattcg tggagagggg attttacctg atggtggaga atacaaaccc
961 ccttctgatt ctttgaaaag cagagactat tacacggatt tcctaattac actggctgtg
1021 ccctcggcag tggcactggt cctttttcta atacttgctt atatcatgtg ctgccgacgg
1081 gaaggcgtgg aaaagagaaa catgcaaaca ccagacatcc aactggtcca tcacagtgct
1141 attcagaaat ctaccaagga gcttcgagac atgtccaaga atagagagat agcatggccc
1201 ctgtcaacgc ttcctgtgtt ccaccctgtg actggggaaa tcatacatcc tttacacaca
1261 gacaactatg atagcacaaa catgccattg atgcaaacgc agcagaactt gccacatcag
1321 actcagattc cccaacagca gactacaggt aaatggtatc cctgaagaaa gaaaactgac
1381 tgaagcaatg aatttataat cagacaatat agcagttaca tcacatttct tttctcttcc
1441 aataatgcat gagcttttct ggcatatgtt atgcatgttg gcagtattaa gtgtatacca
1501 aataatacaa cataactttc attttactaa tgtatttttt tgtacttaaa gcatttttga
1561 caatttgtaa aacattgatg actttatatt tgttacaata aaagttgatc tttaaaataa
1621 atattattaa tgaagccaaa aaaaaaaaaa aaa
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