LOCUS BC021697 1249 bp mRNA linear HUM 03-NOV-2008
DEFINITION Homo sapiens 15 kDa selenoprotein, mRNA (cDNA clone MGC:24367
IMAGE:4051151), complete cds.
ACCESSION BC021697
VERSION BC021697.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1249)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1249)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (14-JAN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 31 Row: o Column: 24
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 42741647.
FEATURES Location/Qualifiers
source 1..1249
/db_xref="H-InvDB:HIT000039252"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:24367 IMAGE:4051151"
/tissue_type="Kidney, hypernephroma"
/clone_lib="NIH_MGC_58"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..1249
/gene="SEP15"
/db_xref="GeneID:9403"
/db_xref="MIM:606254"
CDS 28..402
/gene="SEP15"
/codon_start=1
/transl_except=(pos:313..315,aa:Sec)
/product="15 kDa selenoprotein"
/protein_id="AAH21697.3"
/db_xref="GeneID:9403"
/db_xref="MIM:606254"
/translation="MVAMAAGPSGCLVPAFGLRLLLATVLQAVSAFGAEFSSEACREL
GFSSNLLCSSCDLLGQFNLLQLDPDCRGCCQEEAQFETKKLYAGAILEVCGUKLGRFP
QVQVCPWFRPCIKAFGRQWEHC"
BASE COUNT 400 a 212 c 258 g 379 t
ORIGIN
1 ggggaggcag ccagaaacct gcggaaaatg gtagcgatgg cggctgggcc gagtgggtgt
61 ctggtgccgg cgtttgggct acggttgttg ttggcgactg tgcttcaagc ggtgtctgct
121 tttggggcag agttttcatc ggaggcatgc agagagttag gcttttctag caacttgctt
181 tgcagctctt gtgatcttct cggacagttc aacctgcttc agctggatcc tgattgcaga
241 ggatgctgtc aggaggaagc acaatttgaa accaaaaagc tgtatgcagg agctattctt
301 gaagtttgtg gatgaaaatt gggaaggttc cctcaagtcc aagtatgtcc gtggttcaga
361 ccctgtatta aagcttttgg acgacaatgg gaacattgct gaagaactga gcattctcaa
421 atggaacaca gacagtgtag aagaattcct gagtgaaaag ttggaacgca tataaatctt
481 gcttaaattt tgtcctatcc ttttgttacc ttatcaaatg aaatattaca gcacctagaa
541 aataatttag ttttgcttgc ttccattgat cagtctttta cttgaggcat taaatatcta
601 attaaatcgt gaaatggcag tatagtccat gatatctaag gagttggcaa gcttaacaaa
661 acccattttt tataaatgtc catcctcctg catttgttga taccactaac aaaatgcttt
721 gtaacagact tgcggttaat tatgcaaatg atagtttgtg ataattggtc cagttttacg
781 aacaacagat ttttaaatta gagaggttaa caagacagat gattactatg cctcatgtgc
841 tgtgtgctct ttgaaaggaa tgacagcaga ctacaaagca aataagatat actgagcctc
901 aacagattgc ctgctcctca gagtctctcc tatttttgta ttacccagct ttctttttaa
961 tacaaatgtt atttatagtt tacaatgaat gcactgcata aaaactttgt agcttcatta
1021 ttgtaaaaca tattcaagat cctacagtaa gagtgaaaca ttcacaaaga tttgcgttaa
1081 tgaagactac acagaaaacc tttctaagga tttgtgtgga tcagatacat acttggcaaa
1141 tttttgagtt ttacattctt acagaaaagt ccatttaaaa gtgatcattt gtaagaccaa
1201 aatataaata aaaagttaca aaaaaaaaaa aaaaaaaaaa aaaaaaaaa
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