LOCUS BC021620 1149 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens CD99 molecule, mRNA (cDNA clone MGC:4214
IMAGE:2957883), complete cds.
ACCESSION BC021620
VERSION BC021620.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1149)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1149)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (14-JAN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 9 Row: d Column: 16.
FEATURES Location/Qualifiers
source 1..1149
/db_xref="H-InvDB:HIT000039229_04"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:4214 IMAGE:2957883"
/tissue_type="Kidney, renal cell adenocarcinoma"
/clone_lib="NIH_MGC_14"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1149
/gene="CD99"
/gene_synonym="MIC2X"
/gene_synonym="MIC2Y"
/db_xref="GeneID:4267"
/db_xref="HGNC:HGNC:7082"
/db_xref="MIM:450000"
CDS 65..622
/gene="CD99"
/gene_synonym="MIC2X"
/gene_synonym="MIC2Y"
/codon_start=1
/product="CD99 molecule"
/protein_id="AAH21620.1"
/db_xref="GeneID:4267"
/db_xref="HGNC:HGNC:7082"
/db_xref="MIM:450000"
/translation="MARGAALALLLFGLLGVLVAAPDGGFDLSDALPDNENKKPTAIP
KKPSAGDDFDLGDAVVDGENDDPRPPNPPKPMPNPNPNHPSSSGSFSDADLADGVSGG
EGKGGSDGGGSHRKEGEEADAPGVIPGIVGAVVVAVAGAISSFIAYQKKKLCFKENAE
QGEVDMESHRNANAEPAVQRTLLEK"
BASE COUNT 292 a 297 c 301 g 259 t
ORIGIN
1 ctgtcctgcc gccttcgccc acgccctgca ctccgggacc gtccctgcgc gctctgggcg
61 caccatggcc cgcggggctg cgctggcgct gctgctcttc ggcctgctgg gtgttctggt
121 cgccgccccg gatggtggtt tcgatttatc cgatgccctt cctgacaatg aaaacaagaa
181 acccactgca atccccaaga aacccagtgc tggggatgac tttgacttag gagatgctgt
241 tgttgatgga gaaaatgacg acccacgacc accgaaccca cccaaaccga tgccaaatcc
301 aaaccccaac caccctagtt cctccggtag cttttcagat gctgaccttg cggatggcgt
361 ttcaggtgga gaaggaaaag gaggcagtga tggtggaggc agccacagga aagaagggga
421 agaggccgac gccccaggcg tgatccccgg gattgtgggg gctgtcgtgg tcgccgtggc
481 tggagccatc tctagcttca ttgcttacca gaaaaagaag ctatgcttca aagaaaatgc
541 agaacaaggg gaggtggaca tggagagcca ccggaatgcc aacgcagagc cagctgttca
601 gcgtactctt ttagagaaat agaagattgt cggcagaaac agcccaggcg ttggcagcag
661 ggttagaaca gctgcctgag gctcctccct gaaggacacc tgcctgagag cagagatgga
721 ggccttctgt tcacggcgga ttctttgttt taatcttgcg atgtgctttg cttgttgctg
781 ggcggatgat gtttactaac gatgaatttt acatccaaag ggggataggc acttggaccc
841 ccattctcca aggcccgggg gggcggtttc ccatgggatg tgaaaggctg gccattatta
901 agtccctgta actcaaatgt caaccccacc gaggcacccc cccgtccccc agaatcttgg
961 ctgtttacaa atcacgtgtc catcgagcac gtctgaaacc cctggtagcc ccgacttctt
1021 tttaattaaa ataaggtaag cccttcaatt tgtttcttca atatttcttt catttgtagg
1081 gatatttgtt tttcatatca gactaataaa aagaaattag aaaaaaaaaa aaaaaaaaaa
1141 aaaaaaaaa
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