LOCUS BC021585 1503 bp mRNA linear HUM 01-SEP-2006 DEFINITION Homo sapiens high-mobility group 20B, mRNA (cDNA clone MGC:32098 IMAGE:4873122), complete cds. ACCESSION BC021585 VERSION BC021585.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1503) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1503) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (14-JAN-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC/DCTD/DTP cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 40 Row: l Column: 3. FEATURES Location/Qualifiers source 1..1503 /db_xref="H-InvDB:HIT000039228" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:32098 IMAGE:4873122" /tissue_type="Skin, melanotic melanoma, high MDR." /clone_lib="NIH_MGC_49" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..1503 /gene="HMG20B" /gene_synonym="BRAF25" /gene_synonym="BRAF35" /gene_synonym="HMGX2" /gene_synonym="PP7706" /gene_synonym="pp8857" /gene_synonym="SMARCE1r" /gene_synonym="SOXL" /db_xref="GeneID:10362" /db_xref="HGNC:HGNC:5002" /db_xref="MIM:605535" CDS 277..924 /gene="HMG20B" /gene_synonym="BRAF25" /gene_synonym="BRAF35" /gene_synonym="HMGX2" /gene_synonym="PP7706" /gene_synonym="pp8857" /gene_synonym="SMARCE1r" /gene_synonym="SOXL" /codon_start=1 /product="HMG20B protein" /protein_id="AAH21585.1" /db_xref="GeneID:10362" /db_xref="HGNC:HGNC:5002" /db_xref="MIM:605535" /translation="MLGAEWSKLQPTEKQRYLDEAEREKQQYMKELRAYQQSEAYKMC TEKIQEKKIKKEDSSSGLMNTLLNGHKGGDCDGFSTFDVPIFTEEFLDQNKAREAELR RLRKMNVAFEEQNAVLQRHTQSMSSARERLEQELALEERRTLALQQQLQAVRQALTAS FASLPVPGTGETPTLGTLDFYMARLHGAIERDPAQHEKLIVRIKEILAQVASEHL" BASE COUNT 342 a 462 c 476 g 223 t ORIGIN 1 gccgccgcgc cggcgggcgg caaggctccg ggccagcatg ggggcttcgt ggtgactgtc 61 aagcaagagc gcggcgaggg tccacgcgcg ggcgagaagg ggtcccacga ggaggagccg 121 gtgaagaaac gcggctggcc caagggcaag aagcggaaga agattctgcc gaatgggccc 181 aaggcaccgg tcacgggcta cgtgcgcttc ctgaacgagc ggcgcgagca gatccgcacg 241 cgccacccgg atctgccctt tcccgagatc accaagatgc tgggcgccga gtggagcaag 301 ctgcagccaa cggaaaagca gcggtacctg gatgaggccg agagagagaa gcagcagtac 361 atgaaggagc tgcgggcgta ccagcagtct gaagcctata agatgtgcac ggagaagatc 421 caggagaaga agatcaagaa agaagactcg agctctgggc tcatgaacac tctcctgaat 481 ggacacaagg gtggggactg cgatggcttc tccaccttcg atgttcccat cttcactgaa 541 gagttcttgg accaaaacaa agcgcgtgag gcggagcttc ggcgcttgcg gaagatgaat 601 gtggccttcg aggagcagaa cgcggtactg cagaggcaca cgcagagcat gagcagcgcg 661 cgcgagcgtc tggagcagga gctggcgctg gaggagcgga ggacgctggc gctgcagcag 721 cagctccagg ccgtgcgcca ggcgctcacc gccagcttcg cctcactgcc ggtgccgggc 781 acgggcgaaa cgcccacgct gggcactctg gacttctaca tggcccggct tcacggagcc 841 atcgagcgcg accccgccca gcacgagaag ctcatcgtcc gcatcaagga aatcctggcc 901 caggtcgcca gcgagcacct gtgaggagtg ggcgggccca cgatgcagag gagaagctgt 961 gggcgcggcc ctgccacacc ccaccccgtg gacgagaggc tgggggtcca ccctttgggg 1021 cctggtccca tcctgcacct tgggggctcc agccccccta aaattaaatt tctgcagcat 1081 ccctttagct ttcaatctcc ccagccccct gaacccggaa aaagcactcg ctgcgcgata 1141 cacccagaag aacctcacag ccgagggtgc ccctcctcgg aggacagcca cgcgctacac 1201 tggctctccg ggccaccccc aggacacagg gcagacgaaa cccaccccca gcacacggca 1261 ggacccccca aattactcac tacggggggc tgtgccatag gccacacagg aagctgcctt 1321 gtggggactt acctggggtg tcccccgcat gcctgtaccc cagatgggtg ggggccggct 1381 ttgcccatcc tgctctcctc cagctgaggg accctggtgg gggtggctcc ttctcactgc 1441 tggatccgga ctttttaaat aaaaacaagt aaaatttgtg ttttaaaaaa aaaaaaaaaa 1501 aaa //