LOCUS BC021553 2624 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens C1q and tumor necrosis factor related protein 1, mRNA
(cDNA clone MGC:31795 IMAGE:4622952), complete cds.
ACCESSION BC021553
VERSION BC021553.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2624)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2624)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (14-JAN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 40 Row: f Column: 5
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 38372916.
FEATURES Location/Qualifiers
source 1..2624
/db_xref="H-InvDB:HIT000039210"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:31795 IMAGE:4622952"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_20"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2624
/gene="C1QTNF1"
/gene_synonym="CTRP1"
/gene_synonym="FLJ90694"
/gene_synonym="GIP"
/gene_synonym="ZSIG37"
/db_xref="GeneID:114897"
/db_xref="HGNC:HGNC:14324"
CDS 56..901
/gene="C1QTNF1"
/gene_synonym="CTRP1"
/gene_synonym="FLJ90694"
/gene_synonym="GIP"
/gene_synonym="ZSIG37"
/codon_start=1
/product="C1q and tumor necrosis factor related protein 1"
/protein_id="AAH21553.1"
/db_xref="GeneID:114897"
/db_xref="HGNC:HGNC:14324"
/translation="MGSRGQGLLLAYCLLLAFASGLVLSRVPHVQGEQQEWEGTEELP
SPPDHAERAEEQHEKYRPSQDQGLPASRCLRCCDPGTSMYPATAVPQINITILKGEKG
DRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPGERCKSHYAAFSVGRKKPMHSNH
YYQTVIFDTEFVNLYDHFNMFTGKFYCYVPGLYFFSLNVHTWNQKETYLHIMKNEEEV
VILFAQVGDRSIMQSQSLMLELREQDQVWVRLYKGERENAIFSEELDTYITFSGYLVK
HATEP"
BASE COUNT 548 a 828 c 733 g 515 t
ORIGIN
1 cctgggcaaa aatttacact gagtcccact cttcgctcca gggcccggca ggaagatggg
61 ctcccgtgga cagggactct tgctggcgta ctgcctgctc cttgcctttg cctctggcct
121 ggtcctgagt cgtgtgcccc atgtccaggg ggaacagcag gagtgggagg ggactgagga
181 gctgccgtcg cctccggacc atgccgagag ggctgaagaa caacatgaaa aatacaggcc
241 cagtcaggac caggggctcc ctgcttcccg gtgcttgcgc tgctgtgacc ccggtacctc
301 catgtacccg gcgaccgccg tgccccagat caacatcact atcttgaaag gggagaaggg
361 tgaccgcgga gatcgaggcc tccaagggaa atatggcaaa acaggctcag caggggccag
421 gggccacact ggacccaaag ggcagaaggg ctccatgggg gcccctgggg agcggtgcaa
481 gagccactac gccgcctttt cggtgggccg gaagaagccc atgcacagca accactacta
541 ccagacggtg atcttcgaca cggagttcgt gaacctctac gaccacttca acatgttcac
601 cggcaagttc tactgctacg tgcccggcct ctacttcttc agcctcaacg tgcacacctg
661 gaaccagaag gagacctacc tgcacatcat gaagaacgag gaggaggtgg tgatcttgtt
721 cgcgcaggtg ggcgaccgca gcatcatgca aagccagagc ctgatgctgg agctgcgaga
781 gcaggaccag gtgtgggtac gcctctacaa gggcgaacgt gagaacgcca tcttcagcga
841 ggagctggac acctacatca ccttcagtgg ctacctggtc aagcacgcca ccgagcccta
901 gctggccggc cacctccttt cctctcgcca ccttccaccc ctgcgctgtg ctgaccccac
961 cgcctcttcc ccgatccctg gactccgact ccctggcttt ggcattcagt gagacgccct
1021 gcacacacag aaagccaaag cgatcggtgc tcccagatcc cgcagcctct ggagagagct
1081 gacggcagat gaaatcacca gggcggggca cccgcgagaa ccctctggga ccttccgcgg
1141 ccctctctgc acacatcctc aagtgacccc gcacggcgag acgcgggtgg cggcagggcg
1201 tcccagggtg cggcaccgcg gctccagtcc ttggaaataa ttaggcaaat tctaaaggtc
1261 tcaaaaggag caaagtaaac cgtggaggac aaagaaaagg gttgttattt ttgtctttcc
1321 agccagcctg ctggctccca agagagaggc cttttcagtt gagactctgc ttaagagaag
1381 atccaaagtt aaagctctgg ggtcagggga ggggccgggg gcaggaaact acctctggct
1441 taattctttt aagccacgta ggaactttct tgagggatag gtggaccctg acatccctgt
1501 ggccttgccc aagggctctg ctggtctttc tgagtcacag ctgcgaggtg atgggggctg
1561 gggccccagg cgtcagcctc ccagagggac agctgagccc cctgccttgg ctccaggttg
1621 gtagaagcag ccgaagggct cctgacagtg gccagggacc cctgggtccc ccaggcctgc
1681 agatgtttct atgaggggca gagctcctgg tacatccatg tgtggctctg ctccacccct
1741 gtgccacccc agagccctgg ggggtggtct ccatgcctgc caccctggca tcggctttct
1801 gtgccgcctc ccacacaaat cagccccaga aggccccggg gccttggctt ctgtttttta
1861 taaaacacct caagcagcac tgcagtctcc catctcctcg tgggctaagc atcaccgctt
1921 ccacgtgtgt tgtgttggtt ggcagcaagg ctgatccaga ccccttctgc ccccactgcc
1981 ctcatccagg cctctgacca gtagcctgag aggggctttt ttctaggctt cagagcaggg
2041 gagagctgga aggggctaga aagctcccgc ttgtctgttt ctcaggctcc tgtgagcctc
2101 agtcctgaga ccagagtcaa gaggaagtac acgtcccaat cacccgtgtc aggattcact
2161 ctcaggagct gggtggcagg agaggcaata gcccctgtgg caattgcagg accagctgga
2221 gcagggttgc ggtgtctcca cggtgctctc gccctgccca tggccacccc agactctgat
2281 ctccaggaac cccatagccc ctctccacct caccccatgt tgatgcccag ggtcactctt
2341 gctacccgct gggcccccaa acccccgctg cctctcttcc ttccccccat cccccacctg
2401 gttttgacta atcctgcttc cctctctggg cctggctgcc gggatctggg gaccctaagt
2461 ccctctcttt aaagaacttc tgcgggtcag actctgaagc cgagttgctg tgggcgtgcc
2521 cggaagcaga gcgccacact cgctgcttaa gctcccccag ctctttccag aaaacattaa
2581 actcagaatt gtgttttcag caaaaaaaaa aaaaaaaaaa aaaa
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