LOCUS BC021541 1580 bp mRNA linear HUM 11-SEP-2007
DEFINITION Homo sapiens proteasomal ATPase-associated factor 1, mRNA (cDNA
clone MGC:13092 IMAGE:3942680), complete cds.
ACCESSION BC021541
VERSION BC021541.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1580)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1580)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (14-JAN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 18 Row: l Column: 13.
FEATURES Location/Qualifiers
source 1..1580
/db_xref="H-InvDB:HIT000039203"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:13092 IMAGE:3942680"
/tissue_type="Lung, small cell carcinoma"
/clone_lib="NIH_MGC_7"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1580
/gene="PAAF1"
/gene_synonym="PAAF"
/db_xref="GeneID:80227"
/db_xref="HGNC:HGNC:25687"
CDS 18..1196
/gene="PAAF1"
/gene_synonym="PAAF"
/codon_start=1
/product="proteasomal ATPase-associated factor 1"
/protein_id="AAH21541.1"
/db_xref="GeneID:80227"
/db_xref="HGNC:HGNC:25687"
/translation="MAAPLRIQSDWAQALRKDEGEAWLSCHPPGKPSLYGSLTCQGIG
LDGIPEVTASEGFTVNEINKKSIHISCPKENASSKFLAPYTTFSRIHTKSITCLDISS
RGGLGVSSSTDGTMKIWQASNGELRRVLEGHVFDVNCCRFFPSGLVVLSGGMDAQLKI
WSAEDASCVVTFKGHKGGILDTAIVDRGRNVVSASRDGTARLWDCGRSGCLGVLADCG
SSINGVAVGAADNSINLGSPEQMPSEREVGTEAKMLLLAREDKKLQCLGLQSRQLVFL
FIGSDAFNCCTFLSGFLLLAGTQDGNIYQLDVRSPRAPVQVIHRSGAPVLSLLSVRDG
FIASQGDGSCFIVQQDLDYVTELTGADCDPVYKVATWEKQIYTCCRDGLVRRYQLSDL
"
BASE COUNT 416 a 334 c 422 g 408 t
ORIGIN
1 gtggaggcgg ggtcgagatg gcggcgcctt tgaggattca gagcgactgg gcgcaagccc
61 tcaggaagga tgaaggggag gcctggctga gctgtcatcc cccagggaaa ccatctttgt
121 atggcagcct gacttgtcaa ggaattggcc tagatggcat cccagaggtt acagcttcag
181 aaggatttac tgtgaatgaa ataaacaaga aaagcattca tatttcatgt ccaaaggaaa
241 atgcatcttc taagtttttg gcaccatata ctactttttc cagaattcat acaaagagta
301 taacatgcct ggacatttcc agcagaggag gtcttggtgt gtcttctagt actgacggga
361 ccatgaaaat ctggcaggct tccaatggag aactcaggag agtattggaa ggacatgtgt
421 ttgatgtgaa ttgttgcagg tttttcccat caggccttgt ggtcctgagt gggggaatgg
481 atgcccagct gaagatatgg tcagctgaag atgctagctg cgtggtgacc ttcaaaggtc
541 acaaaggagg tatcctggat acagccatcg ttgatcgggg gaggaatgtg gtgtctgctt
601 ctcgagatgg gacagcacga ctttgggatt gtgggcgctc aggctgcttg ggagtccttg
661 cagattgtgg ttcttctatc aatggagtgg cggtgggtgc tgctgacaac tccataaacc
721 ttggctcccc tgagcagatg cccagtgaac gggaggttgg aacagaggcc aaaatgctgc
781 tcttggcccg ggaagataag aaacttcagt gcttgggact acagagcagg cagctggtgt
841 tcctctttat tggctcagac gctttcaact gctgtacttt tctctctggc ttcttgctat
901 tggctgggac tcaagatgga aacatttatc agctggatgt gaggagtcca agggctccgg
961 tacaagtcat ccacagatca ggagcaccag ttctatccct gctaagtgtc agagatggat
1021 tcattgctag ccaaggtgat ggaagctgtt ttattgtcca gcaagactta gactatgtca
1081 ctgagctcac tggggctgac tgtgaccctg tgtacaaggt agccacatgg gagaagcaga
1141 tctacacatg ctgtcgagac ggtcttgtac gacgctacca gctttctgac ctctgacttc
1201 ttggaaagag cagtcccggt tagtgaaaag gtttgaccct gatcaacaat gagcagaaac
1261 atcatcagtc cttcccaagg accatggcgt ttaatgtctt gggcacccct tggaaatcac
1321 agaaagtcag ctgtactggc cgtgtggaac tctcatccca agacctactt tgaactgagt
1381 aagaaggtca ttgtgcccac tgcatttgtt ccaacttctc cttgtataaa ctcaccccag
1441 caacacaggg caaggatata gatgctttta gtttgttctt aaaccagttt tgttaaatgt
1501 ttacaaggac ctcagtacta aagcctgttc tctggaggaa ataaagaaaa tatgtttgga
1561 aaaaaaaaaa aaaaaaaaaa
//