LOCUS BC021302 2233 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens chromobox homolog 1 (HP1 beta homolog Drosophila),
mRNA (cDNA clone MGC:29537 IMAGE:5013102), complete cds.
ACCESSION BC021302
VERSION BC021302.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2233)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2233)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (14-JAN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC021302.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 39 Row: l Column: 20
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 34147635.
FEATURES Location/Qualifiers
source 1..2233
/db_xref="H-InvDB:HIT000039200"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:29537 IMAGE:5013102"
/tissue_type="Brain, astrocytoma, grade IV"
/clone_lib="NIH_MGC_98"
/lab_host="DH10B"
/note="Vector: pOTB7"
gene 1..2233
/gene="CBX1"
/gene_synonym="CBX"
/gene_synonym="HP1-BETA"
/gene_synonym="HP1Hs-beta"
/gene_synonym="M31"
/gene_synonym="MOD1"
/db_xref="GeneID:10951"
/db_xref="HGNC:HGNC:1551"
/db_xref="MIM:604511"
CDS 283..840
/gene="CBX1"
/gene_synonym="CBX"
/gene_synonym="HP1-BETA"
/gene_synonym="HP1Hs-beta"
/gene_synonym="M31"
/gene_synonym="MOD1"
/codon_start=1
/product="chromobox homolog 1 (HP1 beta homolog
Drosophila)"
/protein_id="AAH21302.1"
/db_xref="GeneID:10951"
/db_xref="HGNC:HGNC:1551"
/db_xref="MIM:604511"
/translation="MGKKQNKKKVEEVLEEEEEEYVVEKVLDRRVVKGKVEYLLKWKG
FSDEDNTWEPEENLDCPDLIAEFLQSQKTAHETDKSEGGKRKADSDSEDKGEESKPKK
KKEESEKPRGFARGLEPERIIGATDSSGELMFLMKWKNSDEADLVPAKEANVKCPQVV
ISFYEERLTWHSYPSEDDDKKDDKN"
BASE COUNT 681 a 412 c 598 g 542 t
ORIGIN
1 cgctcttcgg ggcccgggtg gtctggaaca atgttgcttg gctgggcggc tgcgggatag
61 ggcggaaggg gacaggcttg aggcttggat aggcgtgagg aggcgcatac gaccgcacaa
121 cccgaggttt gtaactgtat tcggaagacg ccgggtccgg ctgggactgc cagaggaacc
181 tggctttgca ggactacgga ggagtaacgt cgagtgaatt ggaagagggc ccagggccgc
241 acaagcagcg tcacccttta caccagaaag ctggcgggca ctatggggaa aaaacaaaac
301 aagaagaaag tggaggaggt gctagaagag gaggaagagg aatatgtggt ggaaaaagtt
361 ctcgaccgtc gagtggtaaa gggcaaagtg gagtacctcc taaagtggaa gggattctca
421 gatgaggaca acacatggga gccagaagag aacctggatt gccccgacct cattgctgag
481 tttctgcagt cacagaaaac agcacatgag acagataaat cagagggagg caagcgcaaa
541 gctgattctg attctgaaga taagggagag gagagcaaac caaagaagaa gaaagaagag
601 tcagaaaagc cacgaggctt tgctcgaggt ttggagccgg agcggattat tggagctaca
661 gactccagtg gagagctcat gttcctgatg aaatggaaaa actctgatga ggctgacctg
721 gtccctgcca aggaagccaa tgtcaagtgc ccacaggttg tcatatcctt ctatgaggaa
781 aggctgacgt ggcattccta cccctcggag gatgatgaca aaaaagatga caagaactaa
841 cgctcctgag taccagcccc tgtcacatct gactgtgggt ttcaagtggg aagggaagga
901 gttctacttg tcttgacacc atagaggtgg cttgagaaga tgtcctttga agagccagta
961 tagtttctgt gccctgcagc agcccaagtg ctttaaagcc gtttcaagct gtatagtttg
1021 cacacccatc ccagtggagg ggaaagggga taagtgtttc aaggcaacct tttctgcact
1081 ttgctgcgaa aagcaaaggg ccttctatga aggacaaaac ttgcagaatt gggtgtgtgg
1141 gagagcaaaa aaatactgta gatcttcaaa gagcatctcc acaacccaca gccttcttcc
1201 caatagtgtt aactctgcat ttttacagcg tagcatgtgt gtagtttttg gctattactg
1261 gtgtattatt tgggggaggg agggatgggg aggggagaaa gggagatggg tagcatcatt
1321 ttgattaaca tttggggcct gataggggaa atggtgaagc aatggaaaag aacagacaac
1381 taatgatttg cttctatgtc cagaatattt tacctttaaa aaaatgtcat tggcaccata
1441 aataaggact gtgagagact gtttaaaagc tgtgaaagtc tgaaacctat aagccaaggt
1501 gttccctgcc taaacttatt gctgttccca caaaggacta agcctgttca taagttacca
1561 aagttgccat tttggagatg gaaattgacg aggagggaag gtcttttatt ggagagtata
1621 cagtacaagc agatcattct gccttagagg tgctaattcc cgaaattaga agaccctttc
1681 ttttccagta atgaagttat aaatatcagc ttgttcatcc aagccactgg ctgaggtgtt
1741 aggaagagga agagggtggt agaggaggta agacagtagg gaaagacaag ggcccatgct
1801 cttagtgggg aaaactcttg gagccgttta ctttgagctt tgaacactga aaccattgtt
1861 ggcagggttc agtcactgac agcacaagtt tcactgaatt gatccaagag tttagtgatt
1921 tcaaaagcct tggtctcagg agaagattaa actttcatat tgggcagtgg ttcactttaa
1981 aacacacaca tacacacaca aaacaatttt ttaagaaatc ctaataagta acatacccaa
2041 aatgctctgt cttgagtcat gagaaccatc agttcttgat attgtctaga cttgcatcta
2101 gagctacgtt gtaaaattct tttaggcatg tgttagattt ctgtgtaaac tttgtttaaa
2161 tgtaaacttc atactacatt gtcagttttt gtcttaataa aactatagat ttataaaaaa
2221 aaaaaaaaaa aaa
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