LOCUS BC021301 2596 bp mRNA linear HUM 01-SEP-2006
DEFINITION Homo sapiens FERM, RhoGEF and pleckstrin domain protein 2, mRNA
(cDNA clone MGC:29593 IMAGE:5013180), complete cds.
ACCESSION BC021301
VERSION BC021301.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2596)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2596)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (14-JAN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC021301.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 39 Row: l Column: 18
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 7662309.
FEATURES Location/Qualifiers
source 1..2596
/db_xref="H-InvDB:HIT000039199"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:29593 IMAGE:5013180"
/tissue_type="Brain, astrocytoma, grade IV"
/clone_lib="NIH_MGC_98"
/lab_host="DH10B"
/note="Vector: pOTB7"
gene 1..2596
/gene="FARP2"
/gene_synonym="FIR"
/gene_synonym="FRG"
/gene_synonym="KIAA0793"
/gene_synonym="PLEKHC3"
/db_xref="GeneID:9855"
/db_xref="HGNC:HGNC:16460"
CDS 117..2060
/gene="FARP2"
/gene_synonym="FIR"
/gene_synonym="FRG"
/gene_synonym="KIAA0793"
/gene_synonym="PLEKHC3"
/codon_start=1
/product="FARP2 protein"
/protein_id="AAH21301.1"
/db_xref="GeneID:9855"
/db_xref="HGNC:HGNC:16460"
/translation="MGEIEGTYRVLQTAGMRLGAQTPVGVSTLEPGQTLLPRMQEKHL
HLRVKLLDNTMEIFDIEPKCDGQVLLTQVWKRLNLVECDYFGMEFQNTQSYWIWLEPM
KPIIRQIRRPKNVVLRLAVKFFPPDPGQLQEEYTRYLFALQLKRDLLEERLTCADTTA
ALLTSHLLQSEIGDYDETLDREHLKVNEYLPGQQHCLEKILEFHQKHVGQTPAESDFQ
VLEIARKLEMYGIRFHMASDREGTKIQLAVSHMGVLVFQGTTKINTFNWSKVRKLSFK
RKRFLIKLHPEVHGPYQDTLEFLLGSRDECKNFWKICVEYHTFFRLLDQPKPKAKAVF
FSRGSSFRYSGRTQKQLVDYFKDSGMKRIPYERRHSKTHTSVRALTADLPKQSISFPE
GLRTPASPSSANAFYSLSPSTLVPSGLPEFKDSSSSLTDPQVSYVKSPAAERRSGAVA
GGPDTPSAQPLGPPALQPGPGLSTKSPQPSPSSRKSPLSLSPAFQVPLGPAEQGSSPL
LSPVLSDAGGAGMDCEEPRHKRVPADEAYFIVKEILATERTYLKDLEVITVWFRSAVV
KEDAMPATLMTLLFSNIDPIYEFHRGFLREVEQRLALWEGPSKAHTKGSHQRIGDILL
RNMRQLKVFQLHEGHVAGVTKME"
BASE COUNT 673 a 695 c 657 g 571 t
ORIGIN
1 gcgacgccga cgcgagtctg gcggctgctg cttgcgactg cggaggccgg gcgaggccgg
61 tgaggacgcg gcgggcgagc gagaggccga ggtgttttct tcactcatgg tgaagaatgg
121 gggagataga aggaacatac agagtcctgc agactgcagg gatgcgcttg ggtgcccaga
181 cccctgtggg agttagcacc cttgagcctg ggcagactct cttgcccaga atgcaagaga
241 agcacctgca cctcagagta aagctgctgg acaacaccat ggaaatattt gacattgagc
301 ctaaatgcga tggccaggta ttactgacac aagtgtggaa gcgtttaaac ctggtagaat
361 gtgactactt cgggatggag tttcaaaata ctcagtccta ctggatttgg cttgaaccta
421 tgaaacccat cattaggcaa atacgaaggc caaagaatgt ggtgcttcgc ctagctgtaa
481 aattttttcc acctgatcct ggtcagctac aagaagaata tacaagatac ttgtttgcct
541 tgcaacttaa gagagacctg ctggaagagc gtttgacctg tgctgacacc acagcggccc
601 ttctcacgtc ccatctcctg cagtcggaaa taggagatta cgatgaaacg ctggaccgag
661 agcacctcaa agtgaacgag tatttgcctg gccagcagca ctgccttgag aagatactag
721 aattccatca gaagcacgtg ggccagacac ctgctgagtc ggatttccag gtgctcgaaa
781 ttgctcgaaa gttggaaatg tacggcatca gatttcacat ggcttctgac agggaaggaa
841 ccaagattca actggcagtt tcccacatgg gtgtactcgt gttccagggc accaccaaaa
901 tcaacacttt caactggtcc aaggtccgta aactaagctt caagaggaaa agatttctta
961 tcaaacttca tccagaggtt catggacctt accaggacac attagaattt ttgttgggta
1021 gtagagatga atgtaagaac ttctggaaga tttgtgtgga gtatcacacc ttttttagac
1081 ttttggacca acctaagcca aaagcaaaag ccgtcttctt cagccggggc tcctccttca
1141 gatacagtgg aagaactcag aaacaactag tagattattt caaagacagt ggaatgaaga
1201 gaattccata tgaaagaagg cacagcaaga cccacacgtc cgttcgagct ctgactgcag
1261 acctaccaaa acagagcatc tcattccccg agggattgag gactcctgcc tccccatctt
1321 cagcgaatgc cttttactcg ctctctccct ccactctggt cccctctggc ctgccagagt
1381 ttaaggacag cagcagctcc ctcacagatc cccaggtttc ctacgtcaag agtccagctg
1441 cagagaggcg cagtggagca gtggctggag gccccgacac accatcggcc cagcccctcg
1501 ggccccccgc actccagcct ggtccaggcc tttccacgaa gagtcctcag ccttctccct
1561 ccagccggaa gagccccctg agtctgagcc ctgcatttca ggtgcctttg ggcccagctg
1621 aacagggctc atccccactc ctgagccctg tcctcagtga tgctggcgga gccgggatgg
1681 actgcgagga gcccagacac aagcgcgtgc ctgcagacga ggcctacttc atagtcaaag
1741 agattctcgc tacagaacga acatacctca aggatttaga agttattacc gtgtggttcc
1801 gcagcgcagt ggtgaaggag gacgccatgc ctgcgactct gatgacgctg ctcttctcca
1861 acatcgatcc catctatgag ttccacagag gcttcctgcg cgaggtggag cagaggctgg
1921 cactctggga agggccctcc aaagcccaca caaaaggcag tcatcaacga atcggggaca
1981 tcctgctcag gaacatgcgc cagttaaagg tgttccagct ccacgaaggg catgtagcag
2041 gggtcacaaa aatggagtag acttttggat aggcaggggc agcactgggg gaagtgagat
2101 ttctcttcaa taggagcaac ggtacaggtg ttcacatgtg gacaacagtg caggtcgtgc
2161 attgactgtt caggggtctc actcttgctt aacgtgcctg gaacagttct ccctccctct
2221 caggctgctc atgagttcac cacgtgaccg cccaaggtgt ggagctctgc ataacaccat
2281 gaagctgagc cacagtgacg acgacgactc aagctccccc tcctccatcc ctcgcctgtc
2341 ccaccttcta cccaatcctg cgagactctg gccactcctc acacctagag ttcccaaggg
2401 actataggtt ttgctgttct gtgttgagat agccccactt gaagaactgc attcagccta
2461 ggtgcccttt tcctgcctcg acggaagctg agtcaggttg ttaatgagaa agttctactt
2521 atcccaaagg cagttgcact aatttaaaat tgaaatatac acaaatctgt ttgatccaga
2581 aaaaaaaaaa aaaaaa
//