LOCUS BC021300 4075 bp mRNA linear HUM 24-JUL-2006
DEFINITION Homo sapiens stromal interaction molecule 1, mRNA (cDNA clone
MGC:29566 IMAGE:4899542), complete cds.
ACCESSION BC021300
VERSION BC021300.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4075)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 4075)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (14-JAN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Dec 19, 2003 this sequence version replaced BC021300.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 39 Row: j Column: 2
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 21070996.
FEATURES Location/Qualifiers
source 1..4075
/db_xref="H-InvDB:HIT000039198"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:29566 IMAGE:4899542"
/tissue_type="Pancreas, epithelioid carcinoma"
/clone_lib="NIH_MGC_42"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..4075
/gene="STIM1"
/gene_synonym="D11S4896E"
/gene_synonym="GOK"
/db_xref="GeneID:6786"
/db_xref="HGNC:HGNC:11386"
/db_xref="MIM:605921"
CDS 561..2618
/gene="STIM1"
/gene_synonym="D11S4896E"
/gene_synonym="GOK"
/codon_start=1
/product="stromal interaction molecule 1"
/protein_id="AAH21300.1"
/db_xref="GeneID:6786"
/db_xref="HGNC:HGNC:11386"
/db_xref="MIM:605921"
/translation="MDVCVRLALWLLWGLLLHQGQSLSHSHSEKATGTSSGANSEEST
AAEFCRIDKPLCHSEDEKLSFEAVRNIHKLMDDDANGDVDVEESDEFLREDLNYHDPT
VKHSTFHGEDKLISVEDLWKAWKSSEVYNWTVDEVVQWLITYVELPQYEETFRKLQLS
GHAMPRLAVTNTTMTGTVLKMTDRSHRQKLQLKALDTVLFGPPLLTRHNHLKDFMLVV
SIVIGVGGCWFAYIQNRYSKEHMKKMMKDLEGLHRAEQSLHDLQERLHKAQEEHRTVE
VEKVHLEKKLRDEINLAKQEAQRLKELREGTENERSRQKYAEEELEQVREALRKAEKE
LESHSSWYAPEALQKWLQLTHEVEVQYYNIKKQNAEKQLLVAKEGAEKIKKKRNTLFG
TFHVAHSSSLDDVDHKILTAKQALSEVTAALRERLHRWQQIEILCGFQIVNNPGIHSL
VAALNIDPSWMGSTRPNPAHFIMTDDVDDMDEEIVSPLSMQSPSLQSSVRQRLTEPQH
GLGSQRDLTHSDSESSLHMSDRQRVAPKPPQMSRAADEALNAMTSNGSHRLIEGVHPG
SLVEKLPDSPALAKKALLALNHGLDKAHSLMELSPSAPPGGSPHLDSSRSHSPSSPDP
DTPSPVGDSRALQASRNTRIPHLAGKKAVAEEDNGSIGEETDSSPGRKKFPLKIFKKP
LKK"
BASE COUNT 934 a 1145 c 1110 g 886 t
ORIGIN
1 gggcaccgcc agccgcctgg gcacgggact gggcgggggc gctgacctcg gcctaggagg
61 cccaggatcc cggagacgcc cgcgccctca ggaccctgcg ggtcgcacgc cctccccagc
121 ttctgctgct cgctgctctt cggcagggcg aggtcaggtg cccccttctc gcctctcttc
181 tcttctcttc tcttcctcct ccacttctgt gcccgcggag actccggccg cccccttccg
241 caggggtgta gtaatctgcg gagctgacag cagccccgca gccaccctgc ccgaagtctc
301 cggaagcggc acgagctcag gccgccgcag ccccggcgga cccactgttg gacctgagga
361 gccagccctc ctcccgcacc caaacttgga gcacttgacc tttggctgtt ggagggggca
421 ggctcgcggg tggctggaca gctgcggagc cgcgagggca tcttgcctgg agaccgtcgg
481 ctgcactccc gggctcctgg ctttgcctct gggatcccga ggtgtccaca tcagacgcat
541 gttgactgag acctagagtc atggatgtat gcgtccgtct tgccctgtgg ctcctctggg
601 gactcctcct gcaccagggc cagagcctca gccatagtca cagtgagaag gcgacaggaa
661 ccagctcggg ggccaactct gaggagtcca ctgcagcaga gttttgccga attgacaagc
721 ccctgtgtca cagtgaggat gagaaactca gcttcgaggc agtccgtaac atccacaaac
781 tgatggacga tgatgccaat ggtgatgtgg atgtggaaga aagtgatgag ttcctgaggg
841 aagacctcaa ttaccatgac ccaacagtga aacacagcac cttccatggt gaggataagc
901 tcatcagcgt ggaggacctg tggaaggcat ggaagtcatc agaagtatac aattggaccg
961 tggatgaggt ggtacagtgg ctgatcacat atgtggagct gcctcagtat gaggagacct
1021 tccggaagct gcagctcagt ggccatgcca tgccaaggct ggctgtcacc aacaccacca
1081 tgacagggac tgtgctgaag atgacagacc ggagtcatcg gcagaagctg cagctgaagg
1141 ctctggatac agtgctcttt gggcctcctc tcttgactcg ccataatcac ctcaaggact
1201 tcatgctggt ggtgtctatc gttattggtg tgggcggctg ctggtttgcc tatatccaga
1261 accgttactc caaggagcac atgaagaaga tgatgaagga cttggagggg ttacaccgag
1321 ctgagcagag tctgcatgac cttcaggaaa ggctgcacaa ggcccaggag gagcaccgca
1381 cagtggaggt ggagaaggtc catctggaaa agaagctgcg cgatgagatc aaccttgcta
1441 agcaggaagc ccagcggctg aaggagctgc gggagggtac tgagaatgag cggagccgcc
1501 aaaaatatgc tgaggaggag ttggagcagg ttcgggaggc cttgaggaaa gcagagaagg
1561 agctagaatc tcacagctca tggtatgctc cagaggccct tcagaagtgg ctgcagctga
1621 cacatgaggt ggaggtgcaa tattacaaca tcaagaagca aaatgctgag aagcagctgc
1681 tggtggccaa ggagggggct gagaagataa aaaagaagag aaacacactc tttggcacct
1741 tccacgtggc ccacagctct tccctggatg atgtagatca taaaattcta acagctaagc
1801 aagcactgag cgaggtgaca gcagcattgc gggagcgcct gcaccgctgg caacagatcg
1861 agatcctctg tggcttccag attgtcaaca accctggcat ccactcactg gtggctgccc
1921 tcaacataga ccccagctgg atgggcagta cacgccccaa ccctgctcac ttcatcatga
1981 ctgacgacgt ggatgacatg gatgaggaga ttgtgtctcc cttgtccatg cagtccccta
2041 gcctgcagag cagtgttcgg cagcgcctga cggagccaca gcatggcctg ggatctcaga
2101 gggatttgac ccattccgat tcggagtcct ccctccacat gagtgaccgc cagcgtgtgg
2161 cccccaaacc tcctcagatg agccgtgctg cagacgaggc tctcaatgcc atgacttcca
2221 atggcagcca ccggctgatc gagggggtcc acccagggtc tctggtggag aaactgcctg
2281 acagccctgc cctggccaag aaggcattac tggcgctgaa ccatgggctg gacaaggccc
2341 acagcctgat ggagctgagc ccctcagccc cacctggtgg ctctccacat ttggattctt
2401 cccgttctca cagccccagc tccccagacc cagacacacc atctccagtt ggggacagcc
2461 gagccctgca agccagccga aacacacgca ttccccacct ggctggcaag aaggctgtgg
2521 ctgaggagga taatggctct attggcgagg aaacagactc cagcccaggc cggaagaagt
2581 ttcccctcaa aatctttaag aagcctctta agaagtaggc aggatggggt ggcagtaaag
2641 ggacagcttg tccttccctg ggtgttctgt ctctccttcc ctcccttcct tcaagataac
2701 tggccccaag agtggggcat gggaagggct ggtccagggg tctgggcact gtacatacct
2761 gccccctcat ccttgggtcc ttcattatta tttattaact gaccaccatg gcctgcctgc
2821 cctgcctccg tcccaaccat gggctgctgc tgtcactccc tctccacttc agtgcatgtc
2881 ttagttgctg ttccctcagc tcccagctcc acctctgggg ttcagcttct gtctctgctg
2941 tcccagtttt gaggtttggt ttcttgtttc tgtctcttgc tttcaggctc ctccctccca
3001 ccactcccca acttccccta gcagttgcag ggaagatagg acgagtagct tctgacatgt
3061 gtgcctcaga tctgttccac cccactcaca gtggttctgt ttgctccaga ctggggctag
3121 ggcctaatct ttgaagtttg ttctttggta ttgatgtggg tcagaaggag cctcatccta
3181 atctcactca ggcctccagg gatccatggg ggagtgaaac caattctcag agaacaaccc
3241 accagagact tttaaagaga ggccaggctt gggaatgggt tgggagaggc atctgttcat
3301 tggagcatga gtggatgcca gaactgtagg ttataaggca gtcacttttt ctctctactc
3361 ccacccacac ctgcctccct cttacccctg ctcccccaca ctgcaggagg atttgtcttt
3421 aagaggtgct gccccaaagc tccccaagca tcaatactcc tagggctcag gacaagtggc
3481 tcccctggcc aggagagcca cagccatgat acagggctct tatggagccc tggagttgtt
3541 gggcaaggat gctgtcattt tttgaaccaa aagacaaaca ggttaaaagg aaaaaaagta
3601 atctgaattt cccaagtgcc tacgctgcat attccccttg ttagatccca ttttcatgtt
3661 actttgtagc cttggccaga ggctcaaaaa ggacacaacc agtttgggga aggggtggct
3721 aaggaagatg gtataggtga aggcggctgt gtgaccactt tcccccaccc ttcccaccct
3781 ctagacaact ctctccctta cctgtttttg ctatggctgt aaaggtattt ttcctctgcc
3841 ccactccctg ccataccttt atcctgggat cctattttgg gcctggggtg ggtatacctg
3901 gggctggtct taggagggtg ctaggctgca gactgccttg tactccctgg acaccctcaa
3961 atggggtttt ctgtgttatt tcataaaatt ctttgaagtc caataaagca tgtaggagat
4021 tttaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaa
//