LOCUS BC021271 2111 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens enhancer of mRNA decapping 3 homolog (S. cerevisiae),
mRNA (cDNA clone MGC:29460 IMAGE:4811016), complete cds.
ACCESSION BC021271
VERSION BC021271.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2111)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2111)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (14-JAN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC021271.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 39 Row: g Column: 1
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 19923612.
FEATURES Location/Qualifiers
source 1..2111
/db_xref="H-InvDB:HIT000039181"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:29460 IMAGE:4811016"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_21"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2111
/gene="EDC3"
/gene_synonym="FLJ21128"
/db_xref="GeneID:80153"
/db_xref="HGNC:HGNC:26114"
/db_xref="MIM:609842"
CDS 463..1989
/gene="EDC3"
/gene_synonym="FLJ21128"
/codon_start=1
/product="EDC3 protein"
/protein_id="AAH21271.1"
/db_xref="GeneID:80153"
/db_xref="HGNC:HGNC:26114"
/db_xref="MIM:609842"
/translation="MATDWLGSIVSINCGDSLGVYQGRVSAVDQVSQTISLTRPFHNG
VKCLVPEVTFRAGDITELKILEIPGPGDNQHFGDLHQTELGPSGAGCQVGINQNGTGK
FVKKPASSSSAPQNIPKRTDVKSQDVAVSPQQQQCSKSYVDRHMESLSQSKSFRRRHN
SWSSSSRHPNQATPKKSGLKNGQMKNKDDECFGDDIEEIPDTDFDFEGNLALFDKAAV
FEEIDTYERRSGTRSRGIPNERPTRYRHDENILESEPIVYRRIIVPHNVSKEFCTDSG
LVVPSISYELHKKLLSVAEKHGLTLERRLEMTGVCASQMALTLLGGPNRLNPKNVHQR
PTVALLCGPHVKGAQGISCGRHLANHDVQVILFLPNFVKMLESITNELSLFSKTQGQQ
VSSLKDLPTSPVDLVINCLDCPENVFLRDQPWYKAAVAWANQNRAPVLSIDPPVHEVE
QGIDAKWSLALGLPLPLGEHAGRIYLCDIGIPQQVFQEVGINYHSPFGCKFVIPLHSA
"
BASE COUNT 506 a 512 c 565 g 528 t
ORIGIN
1 ggcgcttccg gcagcggcgg cggtggtgaa ggccgatgct gtgggggtgg gcgtggagag
61 aattcttctg tgggtcctct ggtgttgagt ggtcggcttg gtgtggtgtg cggaggagct
121 ccaggcccgt cggcgcggag gctttcaggt ataggctggg tcactagtct taaaacattt
181 cttcttgaga atgtctaaaa gactgtggaa tctgttagat cttatatact tttaagttgg
241 cacctgaaac ttttcatcct agatttacat agtggtcttg ctgtgttgcc cagcctggtc
301 ttgaattcct ggactcaagt gatgctcctg ccttggcttc ccaaactcct ggaattacaa
361 ctcaatgaat gacggttttt gttgctccac atcctcgtca gcatttggtg ttgtcagtgt
421 tttggatttc ggccattctg acagtggtct cacgtgtgaa acatggctac agattggctg
481 ggaagtattg tgtccatcaa ttgtggagat agcttgggtg tctatcaggg aagagtgtca
541 gctgtggatc aggtcagcca gaccatttct ctcacccggc ctttccataa tggagtgaag
601 tgtcttgttc cagaagtcac cttcagggca ggtgacatta cggagttaaa aattctggag
661 ataccaggac ctggagacaa ccaacatttt ggagaccttc atcaaacaga attaggcccc
721 tctggtgctg gctgccaagt gggcatcaat cagaatggca caggcaagtt tgtcaagaag
781 ccagcctctt ccagcagtgc ccctcagaat atccctaaga ggacagatgt gaagagccag
841 gatgttgccg tttccccgca gcagcaacag tgctcaaaga gctatgtcga caggcacatg
901 gaatccttga gtcagtccaa aagtttccgt cgtcggcaca actcctggtc atctagtagc
961 aggcacccaa atcaggcaac tcccaagaaa agtggtttaa agaatggcca gatgaagaat
1021 aaagatgacg agtgcttcgg ggatgatatt gaggagatcc cagacacaga ttttgatttt
1081 gaagggaacc tggctctttt tgacaaggca gctgtgtttg aggagattga tacctatgaa
1141 aggagaagtg gtacccgttc ccggggcatc ccaaatgaaa ggcccactcg gtaccgccat
1201 gatgagaaca tcttggagtc cgagcccatt gtctatcgac ggatcatagt gccccacaac
1261 gtgagcaagg agttctgcac ggactctggc ctggttgtcc caagtatttc ctatgagctg
1321 cataaaaagc tgttgtccgt ggctgagaag catgggctga cccttgagcg gagactggag
1381 atgacaggtg tgtgtgccag tcagatggca ctgaccctcc tcggaggacc taacaggttg
1441 aatcccaaaa atgttcacca gaggcctaca gtggctctac tgtgtggacc tcatgtgaag
1501 ggggctcagg gtatcagctg tggaaggcac ctagccaacc atgatgtcca ggtcatcctt
1561 ttcctgccca attttgtcaa gatgttggaa tctatcacca atgagctgtc gctcttcagc
1621 aagacccaag gccaacaagt gtctagcctc aaagatctgc ccactagccc tgtggacctg
1681 gtcatcaact gcctggattg ccctgagaac gtcttcctgc gcgatcaacc ctggtacaag
1741 gcagctgtgg cctgggccaa ccagaaccgg gcaccagtac tcagcataga ccctcctgtg
1801 catgaagtcg aacagggcat tgatgccaaa tggtcactgg cactgggcct gcctctgcca
1861 ctgggggagc acgcaggccg tatctatttg tgcgacattg gcattcccca gcaggtcttc
1921 caggaggtgg gcatcaacta ccactcgccc tttggctgca agtttgttat cccactgcac
1981 tctgcttaga gggttcctgc gcaggcagga ctctgctgtc ccctgctgct cctgataaca
2041 aacgccttaa ggatatgaag cttcatggac cttgttaaag ttttttctct ttaaaaaaaa
2101 aaaaaaaaaa a
//