LOCUS BC021259 3428 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens tripartite motif-containing 65, mRNA (cDNA clone
MGC:29759 IMAGE:4128330), complete cds.
ACCESSION BC021259
VERSION BC021259.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3428)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3428)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (14-JAN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC021259.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 39 Row: c Column: 9
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 38679904.
FEATURES Location/Qualifiers
source 1..3428
/db_xref="H-InvDB:HIT000090408"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:29759 IMAGE:4128330"
/tissue_type="Brain, neuroblastoma"
/clone_lib="NIH_MGC_19"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..3428
/gene="TRIM65"
/gene_synonym="4732463G12Rik"
/db_xref="GeneID:201292"
/db_xref="HGNC:HGNC:27316"
CDS 35..1588
/gene="TRIM65"
/gene_synonym="4732463G12Rik"
/codon_start=1
/product="tripartite motif-containing 65"
/protein_id="AAH21259.2"
/db_xref="GeneID:201292"
/db_xref="HGNC:HGNC:27316"
/translation="MAAQLLEEKLTCAICLGLYQDPVTLPCGHNFCGACIRDWWDRCG
KACPECREPFPDGAELRRNVALSGVLEVVRAGPARDPGPDPGPGPDPAARCPRHGRPL
ELFCRTEGRCVCSVCTVRECRLHERALLDAERLKREAQLRASLEVTQQQATQAEGQLL
ELRKQSSQIQNSACILASWVSGKFSSLLQALEIQHTTALRSIEVAKTQALAQARDEEQ
RLRGHLEAVARHGCRIRELLEQVDEQTFLQESQLLQPPGPLGPLTPLQWDEDQQLGDL
KQLLSRLCGLLLEEGSHPGAPAKPVDLAPVEAPGPLAPVPSTVCPLRRKLWQNYRNLT
FDPVSANRHFYLSRQDQQVKHCRQSRGPGGPGSFELWQVQCAQSFQAGHHYWEVRASD
HSVTLGVSYPQLPRCRLGPHTDNIGRGPCSWGLCVQEDSLQAWHNGEAQRLPGVSGRL
LGMDLDLASGCLTFYSLEPQTQPLYTFHALFNQPLTPVFWLLEGRTLTLCHQPGAVFP
PGPQEEVLS"
BASE COUNT 716 a 965 c 1006 g 741 t
ORIGIN
1 ccggggcccg cctggctctc gccgccgccg ggccatggcc gcgcagctgc tggaggagaa
61 gctgacctgc gccatctgcc tggggctcta ccaggaccca gtgacgctgc cctgcggcca
121 caacttctgc ggggcctgca tccgggactg gtgggaccgc tgcggaaagg cgtgccccga
181 gtgccgggag ccctttcccg acggcgccga gctgcgccgc aacgtggccc tcagcggcgt
241 gctggaggtg gtgcgcgccg ggcccgcccg ggatcccggc cccgatcccg gccccggccc
301 cgaccctgcc gcgcgctgcc cccgccacgg gcggccgctg gagctcttct gccggaccga
361 gggccgctgt gtgtgcagcg tgtgcaccgt gcgcgagtgt cgcctccacg agcgggcgct
421 gctggatgcc gagcgcctca agcgcgaggc ccagctgaga gccagcctgg aggttaccca
481 gcagcaggcc acccaggccg aaggccagct actagagctg cgcaagcaaa gcagccagat
541 ccagaactcg gcctgcatct tggcctcctg ggtctccggc aagttcagca gcctgctaca
601 ggccctggaa atacagcaca cgacagcact gaggagcatc gaggtggcca agacgcaggc
661 gctggcacag gctcgagacg aggagcagcg gctgcggggc cacttggagg ctgtggctcg
721 ccatggctgc aggatccggg agctcctgga gcaggtggat gagcagacct tcctgcagga
781 atcgcagctc ctccagcccc cagggcctct tgggccactg acccctctgc agtgggatga
841 agaccaacag ctgggtgacc tgaagcagtt gctaagccgg ctgtgtggcc tcctcttgga
901 agaggggagc caccctgggg caccagccaa gcctgtggac ttagcccccg tggaggcccc
961 aggtcccctg gcaccggtcc caagcacagt ttgtccactg aggaggaaac tctggcagaa
1021 ttatcgcaat ctgacctttg atccagtcag cgccaaccgt cacttctatc tgtcgcgcca
1081 ggaccagcag gtgaagcact gtcgtcagtc ccggggccca ggcgggcccg gcagctttga
1141 gctctggcag gtgcaatgtg cccagagctt ccaggccggg caccactact gggaggtgcg
1201 cgcgtcagac cactcggtga cactgggcgt ctcctacccg caactgccac ggtgcaggct
1261 ggggccccac acagacaaca ttggccgggg accctgctcc tgggggctct gcgtccagga
1321 ggacagcctc caggcctggc acaacgggga agcccagcgc ctcccagggg tgtcagggcg
1381 gctcctgggc atggatttgg acctggcctc aggctgcctc accttctaca gcctggagcc
1441 ccagacccag cccctgtaca ccttccatgc cctcttcaac cagcccctca cccccgtctt
1501 ctggctcctc gagggtagga ccctgaccct gtgccatcag ccaggggctg tgttccctcc
1561 ggggccccag gaagaggtgc tcagctgaag aaggcatggg atggagccct ggcatagctg
1621 ccaccatgcc tatgtgccca agagctgccc agcttcagct tggggactgg aggaccagct
1681 gttggcctct ctgttaactc agaaagagat gggaggttgg gggaggtgag cataaacgca
1741 gagttcactg ttgcagcctt tttgaagggg acacagtcta ggagggggat aaatgggatg
1801 cccttgcccc agagagaacc cagttctagg tactgtctgg gcctgggagg cgagagcagt
1861 gcccagggga cttctgggct tacaggacag cgtgtgtgac aaaattcaga tctacctgaa
1921 cttgcctctg gagatgataa gggccaaagg agcagtcagg gaggggcggt gagccagagt
1981 agtcccaggg ggagacagat tcctccctcc tccccgcctg cagctctctt taattttttg
2041 taacatttgg agagacgtcc gtcctgtctt gtagtctttt tattttgtgc atccttataa
2101 ttgtattcta caaacaattt tgttttctgc atttaaacat ttttgtgttt ttaggagatg
2161 gtcttgctct gtcactcagg ctggagtaca gtggcacagt catggctcac tgcagcctcg
2221 agctcctgag ctcaaaggat cctcccacct cagcctccag agtagctcag attacagtgt
2281 tttctgaagt ttcctgactt aacataagca tttttcacat gattgaaaat tttcactgat
2341 tgctgtagtc attctaatga ctatcaagtt tatttatcca ttattggaca tttaaatttc
2401 tttcttttta gctatacaaa cattgatgtg ttttttttga gacaggatct ccatctgtca
2461 cccaggctgg tgtgcagggg tgcggtcatg ggctcatggg attctcctac ctcagcctcc
2521 tgagtagctg ggattacagg tgtatgccac cacgcctggc ttatgatgaa tatttctgag
2581 tgggatgttt ggccacattt atggtcatgt atgtaggctg ttacctcaag tgagtcactc
2641 agggaacaat gagcacttga agattttttt atacaaaagg ccacagtgag gccaccttga
2701 gtcaagccga ctaaggcccc tcaaccctgt cactaagcag cacatgacac tggcaggacc
2761 ttcatctcca gcatcccacc cctgggtgtg ggactttggg gcagccgtgt gtgcaggtgt
2821 cggcacaggc tagctcctcc tggtttggtg tggtgtttgc cattgcagag caagctgcca
2881 cgaagacccc tgggcatgat tttgcttgta tttccggaag tggggttgct gggtcatagg
2941 gcaggtgtaa ttttttttac ttgaaatgtt ccacttcttg ttctgggagg tggttccaag
3001 ggtgtctgct tttggccagg cgcagtggct cacgcttgta atcccagcac tttgggaggc
3061 cgaggcaggc ggatcacaag gtcaggagtt cgagaccagc ctggccaaca aggcaaaacc
3121 ccgtctctac taaaaataca aaaattagcc gggcatggtg gtgtgcgcct gtaatcccag
3181 ctactgggga ggctgaggca gaagaatcgc ttgaacccag gaggtgaggt tgcagtgagc
3241 tgagattgca ccactggact acagcctggg tgacagagcg agactccgtc tctaaaaaaa
3301 aaaaaaaaaa gggagggctg tctgcttttt gtaacttgaa aaactggaca tctatgttat
3361 atgtactcat ggataaatat ttcacaataa aactttttaa aaggataaaa aaaaaaaaaa
3421 aaaaaaaa
//