LOCUS       BC021252                3268 bp    mRNA    linear   HUM 06-OCT-2003
DEFINITION  Homo sapiens sex comb on midleg homolog 1 (Drosophila), mRNA (cDNA
            clone MGC:29533 IMAGE:3355251), complete cds.
ACCESSION   BC021252
VERSION     BC021252.2
KEYWORDS    MGC.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 3268)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 3268)
  AUTHORS   Strausberg,R.
  TITLE     Direct Submission
  JOURNAL   Submitted (14-JAN-2002) National Institutes of Health, Mammalian
            Gene Collection (MGC), Cancer Genomics Office, National Cancer
            Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
            USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     On Aug 19, 2003 this sequence version replaced BC021252.1.
            Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: ATCC
            cDNA Library Preparation: Rubin Laboratory
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: National Institutes of Health Intramural
            Sequencing Center (NISC),
            Gaithersburg, Maryland;
            Web site: http://www.nisc.nih.gov/
            Contact: nisc_mgc@nhgri.nih.gov
            Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
            Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
            Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
            Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
            Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
            McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
            Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
            Young,A., Zhang,L.-H. and Green,E.D.
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAL Plate: 39 Row: a Column: 13
            This clone was selected for full length sequencing because it
            passed the following selection criteria: matched mRNA gi: 6912641.
FEATURES             Location/Qualifiers
     source          1..3268
                     /db_xref="H-InvDB:HIT000039171"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="MGC:29533 IMAGE:3355251"
                     /tissue_type="Eye, retinoblastoma"
                     /clone_lib="NIH_MGC_16"
                     /lab_host="DH10B-R"
                     /note="Vector: pOTB7"
     gene            1..3268
                     /gene="SCMH1"
                     /gene_synonym="Scml3"
                     /db_xref="GeneID:22955"
     CDS             453..2252
                     /gene="SCMH1"
                     /gene_synonym="Scml3"
                     /codon_start=1
                     /product="SCMH1 protein"
                     /protein_id="AAH21252.1"
                     /db_xref="GeneID:22955"
                     /translation="MKLEAQDPRNTTSTCIATVVGLTGARLRLRLDGSDNKNDFWRLV
                     DSAEIQPIGNCEKNGGMLQPPLGFRLNASSWPMFLLKTLNGAEMAPIRIFHKEPPSPS
                     HNFFKMGMKLEAVDRKNPHFICPATIGEVRGSEVLVTFDGWRGAFDYWCRFDSRDIFP
                     VGWCSLTGDNLQPPGTKVVIPKNPYPASDVNTEKPSIHSSTKTVLEHQPGQRGRKPGK
                     KRGRTPKTLISHPISAPSKTAEPLKFPKKRGPKPGSKRKPRTLLNPPPASPTTSTPEP
                     DTSTVPQDAATIPSSAMQAPTVCIYLNKNGSTGPHLDKKKVQQLPDHFGPARASVVLQ
                     QAVQACIDCAYHQKTVFSFLKQGHGGEVISAVFDREQHTLNLPAVNSITYVLRFLEKL
                     CHNLRSDNLFGNQPFTQTHLSLTAIEYSHSHDRYLPGETFVLGNSLARSLEPHSDSMD
                     SASNPTNLVSTSQRHRPLLSSCGLPPSTASAVRRLCSRGVLKGSNERRDMESFWKLNR
                     SPGSDRYLESRDASRLSGRDPSSWTVEDVMQFVREADPQLGPHADLFRKHEIDGKALL
                     LLRSDMMMKYMGLKLGPALKLSYHIDRLKQGKF"
     misc_feature    669..974
                     /gene="SCMH1"
                     /gene_synonym="Scml3"
                     /note="MBT; Region: Present in Drosophila Scm, l(3)mbt,
                     and vertebrate SCML2"
                     /db_xref="CDD:smart00561"
     misc_feature    2040..2237
                     /gene="SCMH1"
                     /gene_synonym="Scml3"
                     /note="SAM; Region: SAM domain (Sterile alpha motif). It
                     has been suggested that SAM is an evolutionarily conserved
                     protein binding domain that is involved in the regulation
                     of numerous developmental processes in diverse eukaryotes.
                     The SAM domain can potentially function as a protein
                     interaction module through its ability to homo- and
                     heterooligomerise with other SAM domains"
                     /db_xref="CDD:pfam00536"
BASE COUNT          820 a          937 c          802 g          709 t
ORIGIN      
        1 atgcagccta atgcaagcag ggggcatatt tcagcccttt tggtgttaca gcaactcttt
       61 tagccacgcc gttcagcaga tcccgagttc ttgtcctgca accaggaaga atgaggtacg
      121 cagacaagtg gagggtgagc aagatgaaga ggtgctgtat tgagcaatgg aacagctcag
      181 agaagactca cagtgccagg gcgtcccagt gagtgttcag cccctagcag gaaggatagc
      241 tcctctctgc agtgatagac tggagtgatg ttagaaaaca caaatatggt cacctatcag
      301 agtctgcatc ccaatatcaa gaagctgctg acatcctgga tctaggtcat tttacctggg
      361 acaaatacct aaaagaaaca tgttcagtcc cagcgcctgt ccattgcttc aagcagtcct
      421 acacacctcc aagcaacgag ttcaagatca gtatgaaatt ggaagcacag gaccccagga
      481 acaccacatc cacctgtatt gccacagtag ttggactgac aggtgcccgc cttcgcctgc
      541 gccttgatgg gagcgacaac aaaaatgact tctggcggct ggttgactca gctgaaatcc
      601 agcctattgg gaactgtgaa aagaatgggg gtatgctaca gccacctctt ggatttcggc
      661 tgaatgcgtc ttcttggccc atgttccttt tgaagacgct aaatggagca gagatggctc
      721 ccatcaggat tttccacaag gagccaccat cgccttccca caacttcttc aaaatgggaa
      781 tgaagctaga agctgtggac aggaagaacc ctcatttcat ttgcccagcc actattgggg
      841 aggttcgggg ctcagaggtg cttgtcactt ttgatgggtg gcgaggggcc tttgactact
      901 ggtgccgctt cgactcccga gacatcttcc ctgtgggctg gtgttccttg actggagaca
      961 acctgcagcc tcctggcacc aaagttgtga ttccaaagaa tccctatcct gcctccgatg
     1021 tgaatactga gaagcccagc atccacagca gcaccaaaac tgtcttggaa catcaaccag
     1081 ggcagagggg gcgtaaacca ggaaagaagc ggggccggac acccaagacc ctaatttccc
     1141 atcccatctc tgccccatcc aagacagctg aacctttgaa attcccaaag aagagaggtc
     1201 ccaaacctgg cagcaagagg aaacctcgga ctttgctgaa cccaccacct gcctcaccaa
     1261 caaccagcac tcctgaaccg gataccagca ctgtacccca ggatgctgcc accatcccca
     1321 gctcagccat gcaggcccca acagtttgta tctacttgaa caagaatggc agcacaggcc
     1381 cccacttaga taagaagaag gtccagcaac tccctgacca ttttggacca gcccgtgcct
     1441 ctgtggtgtt gcagcaggct gtccaggcct gtatcgactg tgcttatcac cagaaaaccg
     1501 tcttcagctt cctcaagcaa ggccatggtg gtgaggttat ctcagccgtg tttgaccggg
     1561 aacagcatac cctcaacctc ccagcagtca acagcatcac ctacgtcctc cgcttcctgg
     1621 agaaactctg ccacaacctt cgtagtgaca atctgtttgg caaccagccc tttacacaga
     1681 ctcacttgtc actcactgcc atagagtaca gccacagcca cgacaggtac ctaccaggtg
     1741 aaacctttgt cctggggaat agtctggccc gctccttgga accacactca gactcaatgg
     1801 actctgcctc aaatcccacc aaccttgtca gcacctccca aaggcaccgg cccttgcttt
     1861 catcctgtgg cctcccacca agcactgcct cagctgtgcg caggctatgc tccaggggag
     1921 tgttaaaagg atcaaatgaa agaagggata tggaatcatt ttggaaacta aatcgttccc
     1981 cagggtcgga ccgatacctg gagagccgcg atgcctctcg actgagtggc cgggacccct
     2041 cctcatggac agtcgaggat gtgatgcagt ttgtccggga agctgatcct cagcttggac
     2101 cccacgctga cctgtttcgc aaacacgaga tcgatggcaa ggccctgctg ctgctgcgca
     2161 gtgacatgat gatgaagtac atgggcctga agctggggcc tgcactcaag ctctcctacc
     2221 acattgaccg gctgaagcag ggcaagttct gaaccaggag aggcagccta gacaaccaag
     2281 tggcagcagg tgggggcatt cttctaggaa tgaggggcat cagcccaccc caggcacctc
     2341 agtggggttc cgggccacct caggactcca agaggctgtg tggagccacc actcctagcc
     2401 acagctgcca tgataagtcc ttccatgaag gactgaggag ggagagtggg ggtccagggc
     2461 tggtgctgct cttccctcag ctctgccggg gctctaaggt ccctctattt atttctcaac
     2521 cctggctggc ctctcaccag gagtttaggc tgaatgcctt ccacgtgatg gaggaaaagg
     2581 ccaactctgt cctggtcttg ctgtggcacc ccatcgcccc acagctcgta ccttctcacc
     2641 agattcccct gaatccaaac tcgtggtgca aacctctacc ttttttacaa aaagatctta
     2701 ttgttaattt attgtttctg gcacttgggc aaaccctgta gttaatactc ctcccacact
     2761 agacactggg tttcaggagg agggagactg ccctgctttg gtcccagaga ggccctctgc
     2821 agataggcgt ggcccctctt cagaggacac taccctaggg cactttctct ttgaggtgga
     2881 gagacccata aagccttgac cacatcactc catatgggga ggagaaggat ccctgtcacc
     2941 ttctcctctc ttcacggggc ccttttgcag ccctaggcct catctgtggg aagggagtcc
     3001 ctggcttata ctgcccccac cacagctcct tgccctggcc agaactgctg tcgaagaaaa
     3061 tcaggccgga aggccaagaa ggcgctaagg gggatgggag ggcaggtttt ccaggctgga
     3121 gtcggttcca cccactcgcc tgtccacagg cttccttgta agcaagtcag cagcacagct
     3181 actcacgctg ccatctggac ttattttatg tcaatctgtt tataaataaa aaccaatata
     3241 gataaaaaaa aaaaaaaaaa aaaaaaaa
//