LOCUS BC021250 2703 bp mRNA linear HUM 30-SEP-2003
DEFINITION Homo sapiens hypothetical protein BC004337, mRNA (cDNA clone
IMAGE:3347567), partial cds.
ACCESSION BC021250
VERSION BC021250.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2703)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2703)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (14-JAN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC021250.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 39 Row: a Column: 9
This clone was selected for full length sequencing because it
passed the following selection criteria: GenomeScan gene
prediction.
FEATURES Location/Qualifiers
source 1..2703
/db_xref="H-InvDB:HIT000039169"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3347567"
/tissue_type="Kidney, renal cell adenocarcinoma"
/clone_lib="NIH_MGC_14"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..2703
/gene="LOC90826"
/db_xref="GeneID:90826"
CDS <1..2536
/gene="LOC90826"
/codon_start=2
/product="LOC90826 protein"
/protein_id="AAH21250.2"
/db_xref="GeneID:90826"
/translation="SNSRPRSRRDAGGGAGAAGRDELVSRSLQSAEHCLGVQDFGTAY
AHYLLVLSLAPELKHDVKETFQYTLFRWAEELDALSRIQDLLGCYEQALELFPDDEVI
CNSMGEHLFRMGFRDEAAGYFHKAVKLNPDFSDAKENFYRVANWLVERWHFIMLNDTK
RNTIYNAAIQKAVCLGSKSVLDIGAGTGILSMFAKKAGAHSVYACELSKTMYELACDV
VAANKMEAGIKLLHTKSLDIEIPKHIPERVSLVVTETVDAGLFGEGIVESLIHAWEHL
LLQPKTKGESANCEKYGKVIPASAVIFGMAVECAEIRRHHRVGIKDIAGIHLPTNVKF
QSPAYSSVDTEETIEPYTTEKMSRVPGGYLALTECFEIMTVDFNNLQELKSLATKKPD
KIGIPVIKEGILDAIMVWFVLQLDDEHSLSTSPSEETCWEQAVYPVQDLADYWIKPGD
HVMMEVSCQDCYLRIQSISVLGLECEMDVAKSFTQNKDLLSLGNEAELCSALPNLQTS
KPDAVEQTCILESTEIALLNNIPYHEGFKMAMSKVLSSLTPEKLYQTMDTHCQNEMSS
GTGQSNTVQNILEPFYVLDVSEGFSVLPVIAGTLGQVKPYSSVEKDQHRIALDLISEA
NHFPKETLEFWLRHVEDESAMLQRPKSDKLWSIIILDVIEPSGLIQQEIMEKAAISRC
LLQSGGKIFPQYVLMFGLLVESQTLLEENAVQGTERTLGLNIAPFINQFQVPIRVFLD
LSSLPCIPLSKPVELLRLDLMTPYLNTSNREVKVYVCKSGRLTAIPFWYHMYLDEEIR
LDTSSEASHWKQAAVVLDNPIQVEMGEELVLSIQHHKSNVSITVKQ"
misc_feature 440..844
/gene="LOC90826"
/note="COG4076; Region: Predicted RNA methylase [General
function prediction only]"
/db_xref="CDD:COG4076"
BASE COUNT 826 a 493 c 633 g 751 t
ORIGIN
1 gtcgaactcg cggcccaggt cccgccgaga cgccgggggt ggcgctgggg cagccggccg
61 ggacgagctg gtgtcgcggt ccttgcagag cgcagagcac tgtctgggcg tccaggactt
121 cggcactgcc tatgcccact acctcctcgt gctcagcctg gcgccggagc tgaaacacga
181 cgtgaaggaa acttttcagt acacactttt cagatgggct gaagagcttg atgctctcag
241 tcggatacaa gacttacttg gttgctatga gcaggccttg gaactgtttc ctgatgatga
301 agtgatttgc aatagtatgg gggagcatct cttcagaatg ggctttaggg atgaagcagc
361 tgggtatttt cataaagcag tgaagctaaa ccctgatttc agtgatgcaa aggagaattt
421 ttatcgtgtt gcaaactggt tggtggaacg ctggcacttt atcatgctta atgacaccaa
481 gaggaataca atttataatg cagcaatcca aaaggcagtt tgtttggggt ccaaaagtgt
541 tttggacatt ggagcaggaa ctggaatact aagcatgttt gctaaaaaag ctggagcaca
601 ttccgtgtat gcctgtgagt tatccaagac catgtatgaa cttgcctgtg atgtcgtggc
661 agcaaacaag atggaagcag ggatcaaact cttacatacg aagtcacttg acatagagat
721 tccaaaacat attcccgaaa gagtgtccct agttgtaaca gaaactgtcg atgcaggttt
781 atttggagaa ggaattgtgg agagtttgat tcatgcatgg gagcatttac ttttacagcc
841 aaagaccaaa ggtgaaagtg ctaattgtga aaagtatggg aaagttatac cagcaagtgc
901 tgttatattt gggatggcag tagaatgtgc agagataaga agacatcata gagtgggtat
961 taaggacatt gctggtatcc atttgccaac aaatgtgaaa tttcagagtc cggcttattc
1021 ttctgtagat actgaagaaa caattgaacc ttatacaact gaaaagatga gtcgagttcc
1081 tggaggatat ttggctttga cagagtgctt tgaaattatg acagtagatt tcaacaacct
1141 tcaggaatta aaaagtcttg caactaaaaa gcctgataag attggtattc ctgttattaa
1201 agaaggcata ctagatgcta ttatggtttg gtttgtgctc cagcttgatg atgaacatag
1261 tttatccaca agtcctagtg aggaaacatg ttgggaacag gctgtctacc ccgtacagga
1321 ccttgcagac tactggataa agcctggaga ccatgtgatg atggaagtat cttgtcaaga
1381 ctgttactta agaatccaga gtattagtgt cttgggtttg gaatgtgaaa tggatgttgc
1441 aaaaagtttt acccagaata aagacttgtt atcgttagga aatgaggctg aactttgtag
1501 tgccctccct aaccttcaga ccagtaaacc agatgctgta gagcagacat gtatattgga
1561 atctacagaa attgctttgc ttaacaacat cccatatcat gaaggcttta aaatggcaat
1621 gagcaaagtt ttgtcttcac tgactccaga gaaactgtat cagaccatgg atactcactg
1681 tcagaatgag atgagctctg gaactggaca gagtaatact gtacagaaca tccttgaacc
1741 tttctacgtg ttagatgtgt ccgaaggctt ctctgttctg cctgttattg ctggcacact
1801 tgggcaggtt aaaccataca gttctgtgga gaaagaccag catcgtattg ctctggacct
1861 catatctgaa gccaatcact ttcctaaaga aacacttgag ttttggctga gacatgtgga
1921 ggatgaatct gctatgttac aaaggccaaa atcagacaag ttatggagca taattatatt
1981 ggatgtcatt gagccatctg ggctcattca gcaggaaata atggaaaaag ctgcaatatc
2041 caggtgttta ctacaatctg gaggcaagat ctttcctcag tatgtgctga tgtttgggtt
2101 gcttgtggaa tcacagacac tcctagagga gaatgctgtt caaggaacag aacgtactct
2161 tggattaaat atagcacctt ttattaacca gtttcaggta cctatacgtg tatttttgga
2221 cctatcctca ttgccctgta tacctttaag caagccagtg gaactcttaa gactagattt
2281 aatgactccg tatttgaaca cctctaacag agaagtaaag gtatacgttt gtaaatctgg
2341 aagactgact gctattccat tttggtatca tatgtacctt gatgaagaga ttaggttgga
2401 tacttcaagt gaagcctccc actggaaaca agctgcagtt gttttagata atcccatcca
2461 ggttgaaatg ggagaggaac ttgtactcag cattcagcat cacaaaagca atgtcagcat
2521 cacagtaaag caatgaagag cagttttcca atgaaaactg tgtaaataga gcatcaacaa
2581 gtacaaaatt cttgtcttaa ttagtggggg tatataaaaa ttccttgtaa tggtcaaata
2641 ttttttaaaa ttgacattaa taaagcatat tttaaaagat tctaaaaaaa aaaaaaaaaa
2701 aaa
//