LOCUS BC021215 1777 bp mRNA linear HUM 24-JUL-2006
DEFINITION Homo sapiens chromosome 5 open reading frame 22, mRNA (cDNA clone
MGC:12584 IMAGE:4302543), complete cds.
ACCESSION BC021215
VERSION BC021215.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1777)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1777)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (14-JAN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC021215.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 17 Row: n Column: 1
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 8922930.
FEATURES Location/Qualifiers
source 1..1777
/db_xref="H-InvDB:HIT000039146"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:12584 IMAGE:4302543"
/tissue_type="Uterus, leiomyosarcoma"
/clone_lib="NIH_MGC_46"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1777
/gene="C5orf22"
/gene_synonym="FLJ11193"
/db_xref="GeneID:55322"
/db_xref="HGNC:HGNC:25639"
CDS 65..1393
/gene="C5orf22"
/gene_synonym="FLJ11193"
/codon_start=1
/product="chromosome 5 open reading frame 22"
/protein_id="AAH21215.1"
/db_xref="GeneID:55322"
/db_xref="HGNC:HGNC:25639"
/translation="MSDSAGGRAGLRRYPKLPVWVVEDHQEVLPFIYRAIGSKHLPAS
NVSFLHFDSHPDLLIPVNMPADTVFDKETLFGELSIENWIMPAVYAGHFSHVIWFHPT
WAQQIREGRHHFLVGKDTSTTTIRVTSTDHYFLSDGLYVPEDQLENQKPLQLDVIMVK
PYKLCNNQEENDAVSSAKKPKLALEDSENTASTNCDSSSEGLEKDTATQRSDQTCLEP
SCSCSSENQECQTAASTGEILEILKKGKAFVLDIDLDFFSVKNPFKEMFTQEEYKILQ
ELYQFKKPGTNLTEEDLVDIVDTRIHQLEDLEATFADLCDGDDEETVQRWASNPGMES
LVPLVQSLKKRMEVPDYEMVHQAGLTCDYSELPHHISTEQEIECLIQSVHYLLKNLPN
PTLVTIARSSLDDYCPSDQVDTIQEKVLNMLRALYGNLDLQVYAAESPPS"
BASE COUNT 533 a 363 c 350 g 531 t
ORIGIN
1 gccggctttc ccgggtcttc tccagctgcc accgctttac tgcaaaactg acgggcgcaa
61 aaacatgagt gactccgcgg gagggcgcgc tggtctccgg cgttacccca agctcccagt
121 gtgggtggtg gaggatcatc aggaggttct accctttata taccgggcca taggctcaaa
181 gcatcttcct gccagtaatg taagtttttt acatttcgac tcacatccag acctccttat
241 tcctgtgaat atgccagcag acaccgtgtt tgataaggaa acactctttg gagaattaag
301 tattgaaaat tggattatgc ctgcagttta tgctggccat ttttcacatg taatatggtt
361 tcatcccaca tgggctcagc agatcagaga gggcagacac cactttttag taggcaaaga
421 cacttctacc acaacaatca gggttacaag tacagatcat tatttcctaa gtgatggtct
481 gtatgtacct gaagaccagc tagagaacca aaaaccttta caattggatg taattatggt
541 aaaaccttat aaactctgta acaatcaaga agaaaacgat gcagtgtctt ctgctaagaa
601 accaaagcta gccctggaag attcggaaaa cactgcctct actaactgtg actcttcttc
661 agaaggactg gaaaaggaca cagcaacaca gagaagtgac cagacttgcc tagaaccatc
721 atgttcatgt tcttctgaaa atcaggaatg ccagactgct gccagcactg gggaaattct
781 ggaaattttg aagaaaggga aggcatttgt tttagatatt gacttggatt ttttttcagt
841 caagaatccc ttcaaagaaa tgttcactca ggaagagtac aaaatcttac aagagctgta
901 ccaatttaag aaacctggca ccaacctaac agaggaagat ttggtagata ttgttgatac
961 tcgaattcat caattagagg atttagaagc cactttcgct gatttgtgtg atggtgatga
1021 tgaagaaacg gtacagagat gggcttcaaa ccctggaatg gaatcactag ttccccttgt
1081 acagagtttg aaaaaacgga tggaagtacc agactatgaa atggttcacc aggctggttt
1141 aacctgcgat tattcagaac ttcctcacca tatcagcaca gaacaagaaa tagagtgtct
1201 tattcaatct gtgcattatt tgctgaaaaa tttaccaaat cctactcttg tgacaattgc
1261 aaggtcaagt ctggatgatt actgtccttc tgaccaagtt gacactattc aagaaaaggt
1321 cctcaatatg ctacgtgccc tctatggaaa tctagacctc caagtgtatg cagcagagtc
1381 tcctccatct tgaaacaaac aaaacattag gctcctgttg tatcttggtt tagtaacagg
1441 cccttaatta acttatttgt acatgagtct tccagagaac actgttttat attaactttc
1501 agttgaaatc tttcagatat tttgaatctc tgaacaacca ttgtcagttg tgaatgatgg
1561 taaatttttt ggcatcaagt ctcataaccc caactgatag aactgttgct tatctgtctt
1621 ccttaagtat tttttagggt tttgtttttt tttttgtttg tttgtttgtt tgtcttcact
1681 tttcccccag gtctgttgag ctgtatgaga ttcattcata cttcatttat tcattcaact
1741 aatatttgtt gaacacttaa aaaaaaaaaa aaaaaaa
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