LOCUS BC021213 1265 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens PRA1 domain family, member 2, mRNA (cDNA clone
MGC:12776 IMAGE:4297902), complete cds.
ACCESSION BC021213
VERSION BC021213.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1265)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1265)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (14-JAN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Dec 9, 2003 this sequence version replaced BC021213.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Louis Staudt
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 17 Row: l Column: 17
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 6005793.
FEATURES Location/Qualifiers
source 1..1265
/db_xref="H-InvDB:HIT000039144"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:12776 IMAGE:4297902"
/tissue_type="Primary B-Cells from Tonsils"
/clone_lib="NIH_MGC_48"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1265
/gene="PRAF2"
/gene_synonym="JM4"
/db_xref="GeneID:11230"
/db_xref="HGNC:HGNC:28911"
CDS 3..539
/gene="PRAF2"
/gene_synonym="JM4"
/codon_start=1
/product="PRA1 domain family, member 2"
/protein_id="AAH21213.1"
/db_xref="GeneID:11230"
/db_xref="HGNC:HGNC:28911"
/translation="MSEVRLPPLRALDDFVLGSARLAAPDPCDPQRWCHRVINNLLYY
QTNYLLCFGIGLALAGYVRPLHTLLSALVVAVALGVLVWAAETRAAVRRCRRSHPAAC
LAAVLAVGLLVLWVAGGACTFLFSIAGPVLLILVHASLRLRNLKNKIENKIESIGLKR
TPMGLLLEALGQEQEAGS"
BASE COUNT 274 a 435 c 314 g 242 t
ORIGIN
1 ggatgtcgga ggtgcggctg ccaccgctac gcgccctgga cgactttgtt ctggggtcgg
61 cgcgtctggc ggctccggat ccatgcgacc cgcagcgatg gtgccaccgc gtcatcaaca
121 acctcctcta ctaccaaacc aactaccttc tctgcttcgg catcggcctc gctctcgccg
181 ggtacgtgcg gccacttcat acgctcctga gcgcgctggt agtggcggtg gccctcggcg
241 tgctggtgtg ggcagctgag acccgcgcag ctgtgcgccg ctgccgccgc agccaccctg
301 cagcctgcct ggccgcagtg cttgccgtcg gcctcctggt gctctgggtc gcgggcggcg
361 cttgcacctt cctgttcagc atcgccgggc cggtgcttct gatcctggtg cacgcctcgt
421 tgcgcctgcg caaccttaag aacaagattg agaacaagat cgagagcatt ggtctcaagc
481 ggacgccaat gggcctgcta ctagaggcac tgggacaaga gcaggaggct ggatcctagg
541 cccctgggat ctgtacccag gacctggaga ataccacccc acccccagcc cataattggg
601 acccagagcc ctttcccagc acttaaaaca ggagcctaga gccccctgcc caaacaaaac
661 aggacatctg tgaccgccct acccccacgc cagccccaaa ctaagatatc cctcacaccc
721 agcccccatt acctagggac aagagtcttc cccagccttg aacctaggac caagagccac
781 ctacatccag ccccaaaact ggggcttcag gccagagcat ccatggccaa tttcaaattg
841 tgaacccaga gacactccca tccacccttc tccatgctca tccccaaact ggggcctgga
901 gcaaggcact ctcaaatctt gaaccctgga ccaaagcttt tccagacccc accctacctt
961 ccaacccagg tcaagacatt gccaaatctt gaactcagaa cccaagtgtt ccatgcccct
1021 gtgtggatgg agtcgggtat cctgactgtt ggacccctgg tccaggtgat cccgaccctc
1081 accagtccca tttgcctccc tccagctctg cttaggcatt ttgcccctca ccccaatgtt
1141 ccacaccatc gacaaccaag gggtgaggtg gggacaggcc tcagcaggga atggggcgta
1201 tatgttagtg ttgctgcaac aataaagcct gttgcatctc tcatgccaaa aaaaaaaaaa
1261 aaaaa
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