LOCUS BC021201 1173 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens junctional sarcoplasmic reticulum protein 1, mRNA
(cDNA clone MGC:13120 IMAGE:4106867), complete cds.
ACCESSION BC021201
VERSION BC021201.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1173)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1173)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (14-JAN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Dec 9, 2003 this sequence version replaced BC021201.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 17 Row: c Column: 18
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 39725701.
FEATURES Location/Qualifiers
source 1..1173
/db_xref="H-InvDB:HIT000039138"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:13120 IMAGE:4106867"
/tissue_type="Muscle, rhabdomyosarcoma"
/clone_lib="NIH_MGC_17"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1173
/gene="JSRP1"
/gene_synonym="FLJ32416"
/gene_synonym="JP-45"
/db_xref="GeneID:126306"
/db_xref="HGNC:HGNC:24963"
/db_xref="MIM:608743"
CDS 36..1031
/gene="JSRP1"
/gene_synonym="FLJ32416"
/gene_synonym="JP-45"
/codon_start=1
/product="junctional sarcoplasmic reticulum protein 1"
/protein_id="AAH21201.1"
/db_xref="GeneID:126306"
/db_xref="HGNC:HGNC:24963"
/db_xref="MIM:608743"
/translation="MSMTTRAWEELDGGLGSCQALEDHSALAETQEDRASATPRLADS
GSVPHDSQVAEGPSVDTRPKKMEKEPAARGTPGTGKERLKAGASPRSVPARKKAQTAP
PLQPPPPPPALSEELPWGDLSLNKCLVLASLVALLGSAFQLCRDAVPGEAALQARVPE
PWVPPSSAPREPSSPLPKFEAQAPPSAPPAPRAEAEVRPKIPGSREAAENDEEEPGEA
TGEAVREDRVTLADRGPKERPRREGKPRKEKPRKEERPKKERPRKEERPRAAREPREA
LPQRWESREGGHRPWARDSRDAEPRKKQAWVSPRRPDEEQRPGSRQKLRAGKGRD"
BASE COUNT 277 a 374 c 417 g 105 t
ORIGIN
1 ggcggcctgg cccgggacct gctgctgctc cagccatgtc catgacaacc agagcctggg
61 aggagctgga tggcggcctg ggcagctgcc aggccctgga ggaccactct gcgctggccg
121 agacccagga ggacagggct tcagcgacac ccaggctggc cgactccggc agcgtgcccc
181 acgactctca ggtggctgaa ggccccagtg tggacaccag gcccaagaag atggaaaaag
241 agcctgccgc cagggggacc ccaggaacgg ggaaggagag gctgaaagcc ggagcgagcc
301 ctcggagcgt ccccgcgcgc aagaaggcgc agaccgcgcc gcccctgcag ccgccgccgc
361 cgcccccggc cctgagcgag gagctgccct ggggagacct gtcgctcaac aagtgcctgg
421 tgctcgcctc gctggtggcg ctgctgggct cggctttcca gctgtgccgc gacgccgtcc
481 ctggggaggc agcactccaa gcacgtgtgc ccgagccctg ggtcccgcca agctcagccc
541 cgagggagcc atcgtcgccc ctgcctaagt tcgaggccca ggcgcctcca tcagcgccgc
601 ctgcgccccg ggccgaggca gaggtcagac ccaagattcc cgggagtcgg gaggctgcag
661 agaacgacga agaggagccc ggcgaggcca ccggagaggc cgtccgggag gaccgtgtga
721 ccctcgcaga ccggggaccc aaggagaggc ctcggagaga ggggaagccg cggaaggaga
781 agccgcggaa ggaggagaga cctaagaaag agaggccgcg gaaagaggag aggccacggg
841 ccgccaggga gccccgggaa gccctacccc agcgctggga gtcacgcgaa gggggccacc
901 ggccgtgggc acgggactcc agggacgccg agcccaggaa gaagcaggcc tgggtgtccc
961 cgaggcgtcc cgacgaggag cagcggcctg ggagtcgcca gaagctccgc gcaggcaagg
1021 ggcgggactg agccggcccc gcgccggagt ccaggggccc cttctggacg ccccgcgact
1081 ctggcgaaat aaagcgagtg ctgcggcaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1141 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaa
//