LOCUS BC021193 3884 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens solute carrier family 12 (potassium/chloride transporters), member 4, mRNA (cDNA clone MGC:1455 IMAGE:3349710), complete cds. ACCESSION BC021193 VERSION BC021193.2 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3884) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 3884) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (14-JAN-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Aug 19, 2003 this sequence version replaced BC021193.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 5 Row: d Column: 20 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 34147633. FEATURES Location/Qualifiers source 1..3884 /db_xref="H-InvDB:HIT000039130" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:1455 IMAGE:3349710" /tissue_type="Eye, retinoblastoma" /clone_lib="NIH_MGC_16" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..3884 /gene="SLC12A4" /gene_synonym="KCC1" /db_xref="GeneID:6560" /db_xref="HGNC:HGNC:10913" /db_xref="MIM:604119" CDS 70..3327 /gene="SLC12A4" /gene_synonym="KCC1" /codon_start=1 /product="solute carrier family 12 (potassium/chloride transporters), member 4" /protein_id="AAH21193.1" /db_xref="GeneID:6560" /db_xref="HGNC:HGNC:10913" /db_xref="MIM:604119" /translation="MPHFTVVPVDGPRRGDYDNLEGLSWVDYGERAELDDSDGHGNHR ESSPFLSPLEASRGIDYYDRNLALFEEELDIRPKVSSLLGKLVSYTNLTQGAKEHEEA ESGEGTRRRAAEAPSMGTLMGVYLPCLQNIFGVILFLRLTWMVGTAGVLQALLIVLIC CCCTLLTAISMSAIATNGVVPAGGSYFMISRSLGPEFGGAVGLCFYLGTTFAAAMYIL GAIEILLTYIAPPAAIFYPSGAHDTSNATLNNMRVYGTIFLTFMTLVVFVGVKYVNKF ASLFLACVIISILSIYAGGIKSIFDPPVFPVCMLGNRTLSRDQFDICAKTAVVDNETV ATQLWSFFCHSPNLTTDSCDPYFMLNNVTEIPGIPGAAAGVLQENLWSAYLEKGDIVE KHGLPSADAPSLKESLPLYVVADIATSFTVLVGIFFPSVTGIMAGSNRSGDLRDAQKS IPVGTILAIITTSLVYFSSVVLFGACIEGVVLRDKYGDGVSRNLVVGTLAWPSPWVIV IGSFFSTCGAGLQSLTGAPRLLQAIAKDNIIPFLRVFGHGKVNGEPTWALLLTALIAE LGILIASLDMVAPILSMFFLMCYLFVNLACAVQTLLRTPNWRPRFKYYHWALSFLGMS LCLALMFVSSWYYALVAMLIAGMIYKYIEYQGAEKEWGDGIRGLSLSAARYALLRLEE GPPHTKNWRPQLLVLLKLDEDLHVKYPRLLTFASQLKAGKGLTIVGSVIQGSFLESYG EAQAAEQTIKNMMEIEKVKGFCQVVVASKVREGLAHLIQSCGLGGMRHNSVVLGWPYG WRQSEDPRAWKTFIDTVRCTTAAHLALLVPKNIAFYPSNHERYLEGHIDVWWIVHDGG MLMLLPFLLRQHKVWRKCRMRIFTVAQMDDNSIQMKKDLAVFLYHLRLEAEVEVVEMH NSDISAYTYERTLMMEQRSQMLRQMRLTKTEREREAQLVKDRHSALRLESLYSDEEDE SAVGADKIQMTWTRDKYMTETWDPSHAPDNFRELVHIKPDQSNVRRMHTAVKLNEVIV TRSHDARLVLLNMPGPPRNSEGDENYMEFLEVLTEGLERVLLVRGGGREVITIYS" BASE COUNT 782 a 1117 c 1165 g 820 t ORIGIN 1 ggcggggaca gcggcgggga cagcggcggg cggctgggac ggcgggtgcg gcggggccga 61 gcccgcacga tgcctcactt caccgtggtg ccagtggacg ggccgaggcg cggcgactat 121 gacaacctcg aggggctcag ttgggtggac tacggggagc gcgccgagct ggatgactcg 181 gacggacatg gcaaccacag agagagcagc ccttttcttt cccccttgga ggcttccaga 241 ggaattgact actatgacag gaacctggca ctgtttgagg aagagctgga catccgccca 301 aaggtatcgt ctcttctggg aaagctcgtc agctacacca acctcaccca gggcgccaaa 361 gagcatgagg aggccgagag tggggagggc acccgccgga gggcagccga ggcacccagc 421 atgggcaccc tcatgggggt gtacctgccc tgcctgcaga atatctttgg ggttatcctc 481 ttcctgcggc tgacctggat ggtgggcaca gcaggtgtgc tacaggccct cctcatcgtg 541 cttatctgct gctgttgtac cctgctgacg gccatctcca tgagtgccat cgccaccaac 601 ggtgtggttc cagctggggg ctcctatttc atgatctctc gttcactggg gccagaattt 661 ggaggtgctg tgggcctgtg cttctacctg ggaacaacat tcgcagcagc catgtacatc 721 ctgggggcca tcgagatctt gctgacctac attgccccac cagctgccat tttttaccca 781 tcgggtgctc atgacacgtc gaatgccact ttgaacaata tgcgtgtgta tgggaccatt 841 ttcctgacct tcatgaccct ggtggtgttt gtgggggtca agtatgtgaa caaatttgcc 901 tcgctcttcc tggcctgtgt gatcatctcc atcctctcca tctatgctgg gggcataaag 961 tctatatttg accctcccgt gtttccggta tgcatgctgg gcaacaggac cctgtcccgg 1021 gaccagtttg acatctgtgc caagacagct gtagtggaca atgagacagt ggccacccag 1081 ctatggagtt tcttctgcca cagccccaac cttacgaccg actcctgtga cccctacttc 1141 atgctcaaca atgtgaccga gatccctggc atccccgggg cagctgctgg tgtgctccag 1201 gaaaacctgt ggagcgccta cctggagaag ggtgacatcg tggagaagca tgggctgccc 1261 tccgcagatg ccccgagcct gaaggagagc ctgcctctgt acgtggtcgc tgacatcgcc 1321 acatccttca ccgtgctggt cggcatcttc ttcccttctg taacaggcat catggctggc 1381 tcaaaccgct ctggggacct tcgtgacgcc cagaagtcta tccctgtggg gaccattctg 1441 gccatcatta caacttccct cgtgtacttc agcagtgtgg ttctctttgg tgcctgcatt 1501 gagggtgtgg ttctccggga caagtatggc gatggtgtca gcaggaactt ggtggtgggc 1561 acactggcct ggccttcacc ctgggtcatc gtcatcggct ccttcttttc aacgtgtggc 1621 gctggcctcc agagcctcac aggggcacca cgcctattgc aggccattgc caaggacaac 1681 atcatcccct tcctccgggt gtttggccac gggaaggtga atggtgaacc cacatgggca 1741 ctcctcctga cggcactcat cgccgagctg ggcatcctca tcgcctccct cgacatggtg 1801 gcccccatct tatccatgtt ctttctgatg tgctacctgt tcgtgaacct cgcctgtgcg 1861 gtgcagacac tcctgaggac ccccaactgg cggccccggt tcaagtacta tcactgggcg 1921 ctgtccttcc tgggcatgag tctctgcctg gcccttatgt ttgtctcctc ctggtactat 1981 gccctggtgg ccatgctcat cgccggcatg atctacaaat acatcgagta ccaaggggct 2041 gagaaggagt ggggtgacgg gatccgaggc ctgtccctga gcgctgcccg ctacgcgctg 2101 ttgcggctgg aggaggggcc tcctcacacc aagaactggc ggccgcagct gctggtgctg 2161 ctgaagctgg acgaggacct ccacgtgaag tacccgcggc tcctcacctt cgcctcccag 2221 ctcaaggctg gcaagggcct gaccattgtt ggttctgtca tccaggggag cttcttggag 2281 agctatggcg aggctcaggc cgccgagcag accatcaaga acatgatgga aattgagaag 2341 gtgaagggct tctgccaggt ggtggtggcc agcaaggtgc gggaggggct ggcccacctc 2401 atccagtcct gtggcctggg aggcatgcgg cataactccg tggtgctggg ctggccctac 2461 ggctggcgac agagcgagga cccccgtgcc tggaagacct tcattgacac cgtgcgctgc 2521 actacggctg cccacctggc cctgctcgtg cccaagaaca tcgccttcta ccccagcaac 2581 cacgagcgct acctggaggg ccacatagac gtgtggtgga tcgtgcacga tggtggcatg 2641 ctcatgcttc tgcccttcct gctgcgccag cataaggtct ggaggaagtg ccggatgcgc 2701 atcttcacag tggcccagat ggatgacaac agcatccaga tgaagaagga cctggctgtc 2761 tttctgtacc atctgcgcct tgaggccgag gtggaggtgg tggagatgca taacagtgac 2821 atctctgcat acacctacga gcggacgctg atgatggagc agcggtcgca gatgctgcgg 2881 cagatgagac tgaccaagac tgagcgggag cgagaagccc agctggtcaa ggatcggcac 2941 tcggccctga ggctggagag cctgtactcg gacgaggaag atgagtctgc agtgggggct 3001 gacaagatcc agatgacgtg gaccagggac aagtacatga ctgagacctg ggaccccagc 3061 catgcccctg acaatttccg ggagctggtg cacattaagc cggaccaatc caatgtgcgg 3121 cgcatgcaca ctgctgtgaa gctcaatgaa gtcattgtca cgcgctccca cgacgcccgc 3181 ctggttctcc taaacatgcc tggcccaccc aggaacagtg agggcgacga gaactacatg 3241 gagttcctcg aggtgctgac cgagggcctt gagcgggtgc tgttggtgcg cggtggtggc 3301 cgtgaagtca tcaccatcta ctcctgagcc cagtgtcatc ttgtggcctg gagtcgaggt 3361 cttggccagg acataacaag ctgtggtctg gggtaacagc ctcttcccag cacccacctg 3421 ccagccctgc ttgcctggcc ctgtcctgga cccagctttg ctaggtctcc ttggaaacca 3481 ggcctgggcc tcaaaatgga gatggatccc aggtcttgtg ggaccctggg atgtttgggg 3541 actttactat ctagcacccc agtaggcctg tcctggccag agaagactgg taggggccga 3601 gtggggtttg aaggcagccg gcccggccca gcccaggagc gctatttatt gcatatttat 3661 tgtttggatg tcaccatcag agacgaaggg aagggtagcc agggagggag tccagcccag 3721 ctgcctgcag gaagatctgg ctcagtctac tatgggcagg gccccccacc aagctgagcc 3781 gaatggagac agctgagctg aggcctgact ttttcaataa aacattgtgt agttctgggc 3841 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaa //