LOCUS BC021192 3692 bp mRNA linear HUM 27-OCT-2006
DEFINITION Homo sapiens septin 9, mRNA (cDNA clone MGC:1292 IMAGE:3346534),
complete cds.
ACCESSION BC021192
VERSION BC021192.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3692)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3692)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (14-JAN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Sep 16, 2003 this sequence version replaced BC021192.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 5 Row: m Column: 14
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 19923366.
FEATURES Location/Qualifiers
source 1..3692
/db_xref="H-InvDB:HIT000039129"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:1292 IMAGE:3346534"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_20"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..3692
/gene="SEPT9"
/gene_synonym="AF17q25"
/gene_synonym="KIAA0991"
/gene_synonym="MSF1"
/gene_synonym="NAPB"
/gene_synonym="PNUTL4"
/gene_synonym="SINT1"
/db_xref="GeneID:10801"
/db_xref="HGNC:HGNC:7323"
/db_xref="MIM:604061"
CDS 36..1742
/gene="SEPT9"
/gene_synonym="AF17q25"
/gene_synonym="KIAA0991"
/gene_synonym="MSF1"
/gene_synonym="NAPB"
/gene_synonym="PNUTL4"
/gene_synonym="SINT1"
/codon_start=1
/product="septin 9"
/protein_id="AAH21192.1"
/db_xref="GeneID:10801"
/db_xref="HGNC:HGNC:7323"
/db_xref="MIM:604061"
/translation="MERDRISALKRSFEVEEVETPNSTPPRRVQTPLLRATVASSTQK
FQDLGVKNSEPSARHVDSLSQRSPKASLRRVELSGPKAAEPVSRRTELSIDISSKQVE
NAGAIGPSRFGLKRAEVLGHKTPEPAPRRTEITIVKPQESAHRRMEPPASKVPEVPTA
PATDAAPKRVEIQMPKPAEAPTAPSPAQTLENSEPAPVSQLQSRLEPKPQPPVAEATP
RSQEATEAAPSCVGDMADTPRDAGLKQAPASRNEKAPVDFGYVGIDSILEQMRRKAMK
QGFEFNIMVVGQSGLGKSTLINTLFKSKISRKSVQPTSEERIPKTIEIKSITHDIEEK
GVRMKLTVIDTPGFGDHINNENCWQPIMKFINDQYEKYLQEEVNINRKKRIPDTRVHC
CLYFIPATGHSLRPLDIEFMKRLSKVVNIVPVIAKADTLTLEERVHFKQRITADLLSN
GIDVYPQKEFDEDSEDRLVNEKFREMIPFAVVGSDHEYQVNGKRILGRKTKWGTIEVE
NTTHCEFAYLRDLLIRTHMQNIKDITSSIHFEAYRVKRLNEGSSAMANGVEEKEPEAP
EM"
BASE COUNT 802 a 1161 c 1070 g 659 t
ORIGIN
1 cgggactccc gccgctgcta aatatatccg taggaatgga gagggaccgg atctcagcct
61 tgaaaagatc ttttgaggtc gaggaggtcg agacacccaa ctccacccca ccccggaggg
121 tccagactcc cctactccga gccactgtgg ccagctccac ccagaaattc caggacctgg
181 gcgtgaagaa ctcagaaccc tcggcccgcc atgtggactc cctaagccaa cgctccccca
241 aggcgtccct gcggagggtg gagctctcgg gccccaaggc ggccgagccg gtgtcccggc
301 gcactgagct gtccattgac atctcgtcca agcaggtgga gaacgccggg gccatcggcc
361 cgtcccggtt cgggctcaag agggccgagg tgttgggcca caagacgcca gaaccggccc
421 ctcggaggac ggagatcacc atcgtcaaac cccaggagtc agcccaccgg aggatggagc
481 cccctgcctc caaggtcccc gaggtgccca ctgcccctgc caccgacgca gcccccaaga
541 gggtggagat ccagatgccc aagcctgctg aggcgcccac cgcccccagc ccagcccaga
601 ccttggagaa ttcagagcct gcccctgtgt ctcagctgca gagcaggctg gagcccaagc
661 cccagccccc tgtggctgag gctacacccc ggagccagga ggccactgag gcggctccca
721 gctgcgttgg cgacatggcc gacaccccca gagatgccgg gctcaagcag gcgcctgcat
781 cacggaacga gaaggccccg gtggacttcg gctacgtggg gattgactcc atcctggagc
841 agatgcgccg gaaggccatg aagcagggct tcgagttcaa catcatggtg gtcgggcaga
901 gcggcttggg taaatccacc ttaatcaaca ccctcttcaa atccaaaatc agccggaagt
961 cggtgcagcc cacctcagag gagcgcatcc ccaagaccat cgagatcaag tccatcacgc
1021 acgatattga ggagaaaggc gtccggatga agctgacagt gattgacaca ccagggttcg
1081 gggaccacat caacaacgag aactgctggc agcccatcat gaagttcatc aatgaccagt
1141 acgagaaata cctgcaggag gaggtcaaca tcaaccgcaa gaagcgcatc ccggacaccc
1201 gcgtccactg ctgcctctac ttcatccccg ccaccggcca ctccctcagg cccctggaca
1261 tcgagtttat gaaacgcctg agcaaggtgg tcaacatcgt ccctgtcatc gccaaggcgg
1321 acacactcac cctggaggag agggtccact tcaaacagcg gatcaccgca gacctgctgt
1381 ccaacggcat cgacgtgtac ccccagaagg aatttgatga ggactcggag gaccggctgg
1441 tgaacgagaa gttccgggag atgatcccat ttgctgtggt gggcagtgac cacgagtacc
1501 aggtcaacgg caagaggatc cttgggagga agaccaagtg gggtaccatc gaagttgaaa
1561 acaccacaca ctgtgagttt gcctacctgc gggaccttct catcaggacg cacatgcaga
1621 acatcaagga catcaccagc agcatccact tcgaggcgta ccgtgtgaag cgcctcaacg
1681 agggcagcag cgccatggcc aacggcgtgg aggagaagga gccagaagcc ccggagatgt
1741 agacgccacc ctgcccaccc ccgggatcct gcccccaagt catttccgtc ccccccccag
1801 gccctcccac caccccattt tattttatat gattttctcc atttgtcatc gttccccacc
1861 ccttcgacat gctgccagga aacaagggaa ggggcctccc tccgagtgag tcagtgatga
1921 ggccgcggcc tccccgaggt tgtggggagg ctgcactgga gccacaggca ggggtgagag
1981 cacccactga attgacatga ccctctgtcc ccaggcctgg ctccccgagg gctcagaaga
2041 gcagcttcgg tgtgcagatc atccgtctgt gtggggttct cagtgccgga ggccttgggg
2101 tgggggccag gcctcgcact tgcagaggag cccagtgggc tgcacgctcc cctccatccc
2161 catcggccct gtcccctgga gtgtgtcaga gcccagggga gaatgcagcc caccaggagc
2221 acctggaccc cctgcccgcc acatggtgtg gccatcactc agcccctacc cctgccctgc
2281 tcctaagggt agaaaactcc agggtcccct gccaccgact gcccagccac tccaagcccc
2341 ctggcagctg cccctcctgg agcagaaagt gcctttatct cagccatccg cagactgctt
2401 ggccagatgc ggggacaggc tggaatgagg gaggcgtctt catctccctg ccatccccct
2461 ctcacgccac ccccgccccc accgggctgc aggtgctgct gatgcgctgg gatctgattg
2521 aggataaaaa ggaaggagag atgaccccta ccccctcatc ccccagtttt gaaaaggtct
2581 aagcaagtga gtctggtgga ggagctgagg gagggagcca tggaaggtgc cagaaggaag
2641 gttggcgggg gcacgtgtgg gccgtggctt gggctggtca gagtggcgtg agctgcccgg
2701 cgcctgccct gcccaagtga ccagggaagt gtgtgtgtgt ccatgtgtat gcgtgtccgt
2761 ctgtctgtct agtgtctggg tttggcccaa gactgggctg tagttacatt aatgcccagc
2821 cagccacccc tgccactcac ccctcctggc ccaggccttg ctgactctct gagctgggga
2881 ggtgggaggc caggcgagcc tgactctgtt gatctacccg tgcctgggcc cctcccctca
2941 gagcccatgg taacgaaccc ctagaaagga gagaacgggc gtcaggggtg cacagtccac
3001 agctgaagag caaggtttcg tggcagcacg gcccggcccc tcaccctctg tccccacgag
3061 gggacccatg ggggctgtct ttgcagggca cagatgacca aagtcccttc ctgcttcctg
3121 ttacctgtct tgctcctggg gagaaagagg ggcctgatga gactccactc aggtgcacac
3181 atcaccaggt gcatctgcag gcaccgggct ggctgcttgc agccaggaga aggtcagcga
3241 gaaggagtgt atgagtgtga gtgtgtgtgc atggaagttg gggcactggg cgtctgactc
3301 cctccccacc caagagagga aggacccctc accaccccca ctggcgagac agtttacttt
3361 gccgacttgc catgtttttg ccaaaaccaa gattttgaag gaaatgagtg gccagcgcca
3421 gggcccaggc catgtggcct gcccagcctc aatgtcactt ggcggcgggg tggggtgggg
3481 gtgggcagca gcatcccagc cttgagatgc ttcactttcc ttctctgtaa ccagactttg
3541 aaaaattgtt cgtttcatca ggctctgttc ctcaatggcc ttttgctacg tgcctcccga
3601 gaaatttgtc tttttgtata aatgacaaag tgttgaaaat gtatttcctg aaataaatgt
3661 ttcaaatgca gaataaaaaa aaaaaaaaaa aa
//