LOCUS       BC021186                 711 bp    mRNA    linear   HUM 19-JUN-2006
DEFINITION  Homo sapiens U2 small nuclear RNA auxiliary factor 1-like 4, mRNA
            (cDNA clone MGC:33901 IMAGE:5260387), complete cds.
ACCESSION   BC021186
VERSION     BC021186.1
KEYWORDS    MGC.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 711)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 711)
  CONSRTM   NIH MGC Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JAN-2002) National Institutes of Health, Mammalian
            Gene Collection (MGC), Bethesda, MD 20892-2590, USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
            cDNA Library Preparation: Michael J. Brownstein (NHGRI) &  Shiraki
            Toshiyuki and Piero Carninci (RIKEN)
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: Institute for Systems Biology
            http://www.systemsbiology.org
            contact: amadan@systemsbiology.org
            Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
            Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAK Plate: 47 Row: f Column: 20
            This clone was selected for full length sequencing because it
            passed the following selection criteria: matched mRNA gi: 21450690.
FEATURES             Location/Qualifiers
     source          1..711
                     /db_xref="H-InvDB:HIT000039124"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="MGC:33901 IMAGE:5260387"
                     /tissue_type="Brain, hippocampus"
                     /clone_lib="NIH_MGC_95"
                     /lab_host="DH10B"
                     /note="Vector: pBluescriptR"
     gene            1..711
                     /gene="U2AF1L4"
                     /gene_synonym="MGC33901"
                     /gene_synonym="U2AF1-RS3"
                     /gene_synonym="U2AF1L3V1"
                     /gene_synonym="U2AF1RS3"
                     /gene_synonym="U2af26"
                     /db_xref="GeneID:199746"
                     /db_xref="HGNC:HGNC:23020"
                     /db_xref="MIM:601080"
     CDS             21..629
                     /gene="U2AF1L4"
                     /gene_synonym="MGC33901"
                     /gene_synonym="U2AF1-RS3"
                     /gene_synonym="U2AF1L3V1"
                     /gene_synonym="U2AF1RS3"
                     /gene_synonym="U2af26"
                     /codon_start=1
                     /product="U2 small nuclear RNA auxiliary factor 1-like 4"
                     /protein_id="AAH21186.1"
                     /db_xref="GeneID:199746"
                     /db_xref="HGNC:HGNC:23020"
                     /db_xref="MIM:601080"
                     /translation="MAEYLASIFGTEKDKVNCSFYFKIGVCRHGDRCSRLHNKPTFSQ
                     EVFTELQEKYGEIEEMNVCDNLGDHVVGNVYVKFRREEDGERAVAELSNRWFNGQAVH
                     GNVPEVASATSCICGPFPRTSRGSSMGGDPGAGHPRGSILATIPERGTIGVPLITGMA
                     ASEALAPLPFTPNRDRCSWQDLSSKPPSLSCPILPRLPGSIM"
BASE COUNT          163 a          201 c          196 g          151 t
ORIGIN      
        1 agcgtggggc ttgggtaaaa atggctgaat atttagcttc gatattcggg actgagaagg
       61 acaaggttaa ctgctctttt tactttaaga tcggggtctg ccggcacggg gaccggtgct
      121 cccggcttca caacaagccg acattcagcc aggaggtgtt cacagaactg caggagaagt
      181 atggggagat tgaagagatg aatgtgtgcg acaaccttgg ggaccacgtc gtgggcaacg
      241 tctatgtcaa gttccggagg gaggaggatg gagagcgggc cgtggctgaa ctcagtaacc
      301 gctggttcaa cgggcaggct gtgcacggga atgtacccga ggtggcttct gcaacttcat
      361 gcatctgcgg cccatttccc agaacctcca gaggcagctc tatgggcggg gacccaggcg
      421 caggtcaccc ccgaggttcc atactggcca caatccccga gagaggaacc atcggtgttc
      481 ccctgatcac tggcatggcc gcttctgagg ccctggcccc cttacccttc acccccaaca
      541 gggacagatg ttcctggcag gacctctcct caaagccccc ttcactctcc tgccccatcc
      601 ttcccaggct cccgggctcc ataatgtaat ctgttcagca tggagacctt cttctaccgc
      661 ccctgtctta ataaagctgc gtgtttcact tcggcaaaaa aaaaaaaaaa a
//