LOCUS BC021186 711 bp mRNA linear HUM 19-JUN-2006 DEFINITION Homo sapiens U2 small nuclear RNA auxiliary factor 1-like 4, mRNA (cDNA clone MGC:33901 IMAGE:5260387), complete cds. ACCESSION BC021186 VERSION BC021186.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 711) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 711) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (07-JAN-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Miklos Palkovits, M.D., Ph.D. cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki Toshiyuki and Piero Carninci (RIKEN) cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Institute for Systems Biology http://www.systemsbiology.org contact: amadan@systemsbiology.org Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 47 Row: f Column: 20 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 21450690. FEATURES Location/Qualifiers source 1..711 /db_xref="H-InvDB:HIT000039124" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:33901 IMAGE:5260387" /tissue_type="Brain, hippocampus" /clone_lib="NIH_MGC_95" /lab_host="DH10B" /note="Vector: pBluescriptR" gene 1..711 /gene="U2AF1L4" /gene_synonym="MGC33901" /gene_synonym="U2AF1-RS3" /gene_synonym="U2AF1L3V1" /gene_synonym="U2AF1RS3" /gene_synonym="U2af26" /db_xref="GeneID:199746" /db_xref="HGNC:HGNC:23020" /db_xref="MIM:601080" CDS 21..629 /gene="U2AF1L4" /gene_synonym="MGC33901" /gene_synonym="U2AF1-RS3" /gene_synonym="U2AF1L3V1" /gene_synonym="U2AF1RS3" /gene_synonym="U2af26" /codon_start=1 /product="U2 small nuclear RNA auxiliary factor 1-like 4" /protein_id="AAH21186.1" /db_xref="GeneID:199746" /db_xref="HGNC:HGNC:23020" /db_xref="MIM:601080" /translation="MAEYLASIFGTEKDKVNCSFYFKIGVCRHGDRCSRLHNKPTFSQ EVFTELQEKYGEIEEMNVCDNLGDHVVGNVYVKFRREEDGERAVAELSNRWFNGQAVH GNVPEVASATSCICGPFPRTSRGSSMGGDPGAGHPRGSILATIPERGTIGVPLITGMA ASEALAPLPFTPNRDRCSWQDLSSKPPSLSCPILPRLPGSIM" BASE COUNT 163 a 201 c 196 g 151 t ORIGIN 1 agcgtggggc ttgggtaaaa atggctgaat atttagcttc gatattcggg actgagaagg 61 acaaggttaa ctgctctttt tactttaaga tcggggtctg ccggcacggg gaccggtgct 121 cccggcttca caacaagccg acattcagcc aggaggtgtt cacagaactg caggagaagt 181 atggggagat tgaagagatg aatgtgtgcg acaaccttgg ggaccacgtc gtgggcaacg 241 tctatgtcaa gttccggagg gaggaggatg gagagcgggc cgtggctgaa ctcagtaacc 301 gctggttcaa cgggcaggct gtgcacggga atgtacccga ggtggcttct gcaacttcat 361 gcatctgcgg cccatttccc agaacctcca gaggcagctc tatgggcggg gacccaggcg 421 caggtcaccc ccgaggttcc atactggcca caatccccga gagaggaacc atcggtgttc 481 ccctgatcac tggcatggcc gcttctgagg ccctggcccc cttacccttc acccccaaca 541 gggacagatg ttcctggcag gacctctcct caaagccccc ttcactctcc tgccccatcc 601 ttcccaggct cccgggctcc ataatgtaat ctgttcagca tggagacctt cttctaccgc 661 ccctgtctta ataaagctgc gtgtttcact tcggcaaaaa aaaaaaaaaa a //