LOCUS BC021168 1383 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens chromatin modifying protein 5, mRNA (cDNA clone
MGC:22857 IMAGE:3961351), complete cds.
ACCESSION BC021168
VERSION BC021168.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1383)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1383)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (07-JAN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 31 Row: i Column: 23.
FEATURES Location/Qualifiers
source 1..1383
/db_xref="H-InvDB:HIT000039114"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:22857 IMAGE:3961351"
/tissue_type="Bladder, carcinoma"
/clone_lib="NIH_MGC_53"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..1383
/gene="CHMP5"
/gene_synonym="CGI-34"
/gene_synonym="HSPC177"
/gene_synonym="PNAS-2"
/db_xref="GeneID:51510"
/db_xref="HGNC:HGNC:26942"
CDS 46..705
/gene="CHMP5"
/gene_synonym="CGI-34"
/gene_synonym="HSPC177"
/gene_synonym="PNAS-2"
/codon_start=1
/product="chromatin modifying protein 5"
/protein_id="AAH21168.1"
/db_xref="GeneID:51510"
/db_xref="HGNC:HGNC:26942"
/translation="MNRLFGKAKPKAPPPSLTDCIGTVDSRAESIDKKISRLDAELVK
YKDQIKKMREGPAKNMVKQKALRVLKQKRMYEQQRDNLAQQSFNMEQANYTIQSLKDT
KTTVDAMKLGVKEMKKAYKQVKIDQIEDLQDQLEDMMEDANEIQEALSRSYGTPELDE
DDLEAELDALGDELLADEDSSYLDEAASAPAIPEGVPTDTKNKDGVLVDEFGLPQIPA
S"
BASE COUNT 449 a 220 c 296 g 418 t
ORIGIN
1 ggggggtttt gctctagtgt ttgggtttct tcgcggctgc tcaagatgaa ccgactcttc
61 gggaaagcga aacccaaggc tccgccgccc agcctgactg actgcattgg cacggtggac
121 agtagagcag aatccattga caagaagatt tctcgattgg atgctgagct agtgaagtat
181 aaggatcaga tcaagaagat gagagagggt cctgcaaaga atatggtcaa gcagaaagcc
241 ttgcgagttt taaagcaaaa gaggatgtat gagcagcagc gggacaatct tgcccaacag
301 tcattcaaca tggaacaagc caattatacc atccagtctt tgaaggacac caagaccacg
361 gttgatgcta tgaaactggg agtaaaggaa atgaagaagg catacaagca agtgaagatc
421 gaccagattg aggatttaca agaccagcta gaggatatga tggaagatgc aaatgaaatc
481 caagaagcac tgagtcgcag ttatggcacc ccagaactgg atgaagatga tttagaagca
541 gagttggatg cactaggtga tgagcttctg gctgatgaag acagttctta tttggatgag
601 gcagcatctg cacctgcaat tccagaaggt gttcccactg atacaaaaaa caaggatgga
661 gttctggtgg atgaatttgg attgccacag atccctgctt catagatttg catcattcaa
721 gcatatcttg taaaacaaac acatattatg ggactaggaa atatttatct ttccaaattt
781 gccataacag attaggtttc tttcctttct ttgaaggaaa gtttaattac attgctcttt
841 tattttttcc attaagagac tcattgcttg ggaaatgctt tcttcgtact aaaatttgat
901 tccttttttt cttatgaaaa acgaactcag tttaaaagta tttttagctc gtatgacttg
961 ttttcattca ttaataataa tttgaaataa aactaaggaa atggaatctt aaaagtctat
1021 gacagtgtaa ctctacagtc tcaaaatgac ctgataaatt gataagacaa agatgagatt
1081 attggggctg ttcatattat gattcagaat cattttctat tgtggtatta taggttggtt
1141 aaagtgatgg cctttttgat gggttttgtt gtgtcttgtg aacaagtcgt tactgtgtcc
1201 attattggaa tggaattatc actactgtat catgagtggg tattttgatt ctatggttcc
1261 ctcagtatta catcttgact tgtaatcaat tatgaatatt tcttgatatt taatgtatag
1321 gacatttatt tatactcaat aaatattttt caataaaaaa aaaaaaaaaa aaaaaaaaaa
1381 aaa
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