LOCUS BC021163 2783 bp mRNA linear HUM 04-NOV-2003 DEFINITION Homo sapiens CDKN1A interacting zinc finger protein 1, mRNA (cDNA clone MGC:16162 IMAGE:3633796), complete cds. ACCESSION BC021163 VERSION BC021163.2 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2783) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2783) AUTHORS Strausberg,R. TITLE Direct Submission JOURNAL Submitted (07-JAN-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Cancer Genomics Office, National Cancer Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Aug 19, 2003 this sequence version replaced BC021163.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Louis M. Staudt, M.D., Ph.D. cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Institute for Systems Biology http://www.systemsbiology.org contact: amadan@systemsbiology.org Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 24 Row: l Column: 11. FEATURES Location/Qualifiers source 1..2783 /db_xref="H-InvDB:HIT000039112" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:16162 IMAGE:3633796" /tissue_type="Lymph, Burkitt lymphoma" /clone_lib="NIH_MGC_8" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..2783 /gene="CIZ1" /gene_synonym="LSFR1" /gene_synonym="ZNF356" /db_xref="GeneID:25792" CDS 143..2599 /gene="CIZ1" /gene_synonym="LSFR1" /gene_synonym="ZNF356" /codon_start=1 /product="CIZ1 protein" /protein_id="AAH21163.1" /db_xref="GeneID:25792" /translation="MFSQQQQQQLQQQQQQLQQLQQQQLQQQQLQQQQLLQLQQLLQQ SPPQAPLPMAVSRGLPPQQPQQPLLNLQGTNSASLLNGSMLQRALLLQQLQGNLRGYG MASPGLAAPSLTPPQLATPNLQQFFPQATRQSLLGPPPVGVPMNPSQFNLSGRNPQKQ ARTSSSTTPNRKDSSSQTMPVEDKSDPPEGSEEAAEPRMDTPEDQDLPPCPEDIAKEK RTPAPEPEPCEASELPAKRLRSSEEPTEKEPPGQLQVKAQPQARMTVPKQTQTPDLLP EALEAQVLPRFQPRVLQVQAQVQSQTQPRIPSTDTQVQPKLQKQAQTQTSPEHLVLQQ KQVQPQLQQEAEPQKQVQPQVHTQAQPSVQPQEHPPAQVSVQPPEQTHEQPHTQPQVS LLAPEQTPVVVHVCGLEMPPDAVEAGGGMEKTLPEPVGTQVSMEEIQNESACGLDVGE CENRAREMPGVWGAGGSLKVTILQSSDSRAFSTVPLTPVPRPSDSVSSTPAATSTPSK QALQFFCYICKASCSSQQEFQDHMSEPQHQQRLGEIQHMSQACLLSLLPVPRDVLETE DEEPPPRRWCNTCQLYYMGDLIQHRRTQDHKIAKQSLRPFCTVCNRYFKTPRKFVEHV KSQGHKDKAKELKSLEKEIAGQDEDHFITVDAVGCFEGDEEEEEDDEDEEEIEVEEEL CKQVRSRDISREEWKGSETYSPNTAYGVDFLVPVMGYICRICHKFYHSNSGAQLSHCK SLGHFENLQKYKAAKNPSPTTRPVSRRCAINARNALTALFTSSGRPPSQPNTQDKTPS KVTARPSQPPLPRRSTRLKT" misc_feature 1676..1765 /gene="CIZ1" /gene_synonym="LSFR1" /gene_synonym="ZNF356" /note="ZnF_U1; Region: U1-like zinc finger" /db_xref="CDD:smart00451" BASE COUNT 711 a 893 c 753 g 426 t ORIGIN 1 cgagcccaca ggccccggag tagcagcggg gaggccggga gcccgcgggc cggagccgcc 61 cggccgaggc gtgggggctg cggggccggc ccatccgtgg gggcgacttg agcgttgagg 121 gcgcgcgggg aggcgagcca ccatgttcag ccagcagcag cagcagcagc tccagcaaca 181 gcagcagcag ctccagcagt tacagcagca gcagctccag cagcagcaat tgcagcagca 241 gcagttactg cagctccagc agctgctcca gcagtcccca ccacaggccc cgttgcccat 301 ggctgtcagc cgggggctcc ccccgcagca gccacagcag ccgcttctga atctccaggg 361 caccaactca gcctccctcc tcaacggctc catgctgcag agagctttgc ttttacagca 421 gttgcaaggt aacctccgag gctatggcat ggcatcccca ggcctcgcag cccccagcct 481 cacaccccca caactggcca ctccaaattt gcaacagttc tttccccagg ccactcgcca 541 gtccttgctg ggacctcctc ctgttggggt ccccatgaac ccttcccagt tcaacctttc 601 aggacggaac ccccagaaac aggcccggac ctcctcctct accaccccca atcgaaagga 661 ttcttcttct cagacaatgc ctgtggaaga caagtcagac cccccagagg ggtctgagga 721 agccgcagag ccccggatgg acacaccaga agaccaagat ttaccgccct gcccagagga 781 catcgccaag gaaaaacgca ctccagcacc tgagcctgag ccttgtgagg cgtccgagct 841 gccagcaaag agattgagga gctcagaaga gcccacagag aaggaacctc cagggcagtt 901 acaggtgaag gcccagccgc aggcccggat gacagtaccg aaacagacac agacaccaga 961 cctgctgcct gaggccctgg aagcccaagt gctgccacga ttccagccac gggtcctgca 1021 ggtccaggcc caggtgcagt cacagactca gccgcggata ccatccacag acacccaggt 1081 gcagccaaag ctgcagaagc aggcgcaaac acagacctct ccagagcact tagtgctgca 1141 acagaagcag gtgcagccac agctgcagca ggaggcagag ccacagaagc aggtgcagcc 1201 acaggtccac acacaggcac agccaagcgt ccagccacag gagcatcctc cagcgcaggt 1261 gtcagtacag ccaccagagc agacccatga gcagcctcac acccagccgc aggtgtcgtt 1321 gctggctcca gagcaaacac cagttgtggt tcatgtctgc gggctggaga tgccacctga 1381 tgcagtagaa gctggtggag gcatggaaaa gaccttgcca gagcctgtgg gcacccaagt 1441 cagcatggaa gagattcaga atgagtcggc ctgtggccta gatgtgggag aatgtgaaaa 1501 cagagcgaga gagatgccag gggtatgggg cgccgggggc tccctgaagg tcaccattct 1561 gcagagcagt gacagccggg cctttagcac tgtacccctg acacctgtcc cccgccccag 1621 tgactccgtc tcctccaccc ctgcggctac cagcactccc tctaagcagg ccctccagtt 1681 cttctgctac atctgcaagg ccagctgctc cagccagcag gagttccagg accacatgtc 1741 ggagcctcag caccagcagc ggctagggga gatccagcac atgagccaag cctgcctcct 1801 gtccctgctg cccgtgcccc gggacgtcct ggagacagag gatgaggagc ctccaccaag 1861 gcgctggtgc aacacctgcc agctctacta catgggggac ctgatccaac accgcaggac 1921 acaggaccac aagattgcca aacaatcctt gcgacccttc tgcaccgttt gcaaccgcta 1981 cttcaaaacc cctcgcaagt ttgtggagca cgtgaagtcc caggggcata aggacaaagc 2041 caaggagctg aagtcgcttg agaaagaaat tgctggccaa gatgaggacc acttcattac 2101 agtggacgct gtgggttgct tcgagggtga tgaagaagag gaagaggatg atgaggatga 2161 agaagagatc gaggttgagg aggaactctg caagcaggtg aggtccagag atatatccag 2221 agaggagtgg aagggctcgg agacctacag ccccaatact gcatatggtg tggacttcct 2281 ggtgcccgtg atgggctata tctgccgcat ctgccacaag ttctatcaca gcaactcagg 2341 ggcacagctc tcccactgca agtccctggg ccactttgag aacctgcaga aatacaaggc 2401 ggccaagaac cccagcccca ccacccgacc tgtgagccgc cggtgcgcaa tcaacgcccg 2461 gaacgctttg acagccctgt tcacctccag cggccgccca ccctcccagc ccaacaccca 2521 ggacaaaaca cccagcaagg tgacggctcg accctcccag cccccactac ctcggcgctc 2581 aacccgcctc aaaacctgat agagggacct ccctgtccct ggcctgcctg ggtccagatc 2641 tgctaatgct ttttaggagt ctgcctggaa actttgacat ggttcatgtt tttactcaaa 2701 atccaataaa acaaggtagt ttggctgtgc aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa 2761 aaaaaaaaaa aaaaaaaaaa aaa //