LOCUS BC021146 2042 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens melanin-concentrating hormone receptor 1, mRNA (cDNA
clone MGC:32129 IMAGE:4890530), complete cds.
ACCESSION BC021146
VERSION BC021146.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2042)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2042)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-JAN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 40 Row: n Column: 6
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 23065565.
FEATURES Location/Qualifiers
source 1..2042
/db_xref="H-InvDB:HIT000039110"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:32129 IMAGE:4890530"
/tissue_type="Brain, neuroblastoma"
/clone_lib="NIH_MGC_19"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2042
/gene="MCHR1"
/gene_synonym="MCH1R"
/gene_synonym="MGC32129"
/gene_synonym="SLC1"
/db_xref="GeneID:2847"
/db_xref="HGNC:HGNC:4479"
/db_xref="MIM:601751"
CDS 214..1482
/gene="MCHR1"
/gene_synonym="MCH1R"
/gene_synonym="MGC32129"
/gene_synonym="SLC1"
/codon_start=1
/product="melanin-concentrating hormone receptor 1"
/protein_id="AAH21146.1"
/db_xref="GeneID:2847"
/db_xref="HGNC:HGNC:4479"
/db_xref="MIM:601751"
/translation="MSVGAMKKGVGRAVGLGGGSGCQATEEDPLPDCGACAPGQGGRR
WRLPQPAWVEGSSARLWEQATGTGWMDLEASLLPTGPNASNTSDGPDNLTSAGSPPRT
GSISYINIIMPSVFGTICLLGIIGNSTVIFAVVKKSKLHWCNNVPDIFIINLSVVDLL
FLLGMPFMIHQLMGNGVWHFGETMCTLITAMDANSQFTSTYILTAMAIDRYLATVHPI
SSTKFRKPSVATLVICLLWALSFISITPVWLYARLIPFPGGAVGCGIRLPNPDTDLYW
FTLYQFFLAFALPFVVITAAYVRILQRMTSSVAPASQRSIRLRTKRVTRTAIAICLVF
FVCWAPYYVLQLTQLSISRPTLTFVYLYNAAISLGYANSCLNPFVYIVLCETFRKRLV
LSVKPAAQGQLRAVSNAQTADEERTESKGT"
BASE COUNT 454 a 600 c 565 g 423 t
ORIGIN
1 gcaaggcaag cagcagcccc tgtaagcaca cgagacaatc ccaagtgtca gtgggaagga
61 gatccctttc ctgatggggc tgcctgtgtc cagtccctcc cagcttcccc agggccctgg
121 ggctctgcag gcattcagaa gtggaagcca gccacagcct gggactgaag aggttaatgt
181 gcatctgcct ccgaatgtta atgtgtctag gtgatgtcag tgggagccat gaagaaggga
241 gtggggaggg cagttgggct tggaggcggc agcggctgcc aggctacgga ggaagacccc
301 cttcccgact gcggggcttg cgctccggga caaggtggca ggcgctggag gctgccgcag
361 cctgcgtggg tggaggggag ctcagctcgg ttgtgggagc aggcgaccgg cactggctgg
421 atggacctgg aagcctcgct gctgcccact ggtcccaatg ccagcaacac ctctgatggc
481 cccgataacc tcacttcggc aggatcacct cctcgcacgg ggagcatctc ctacatcaac
541 atcatcatgc cttcggtgtt cggcaccatc tgcctcctgg gcatcatcgg gaactccacg
601 gtcatcttcg cggtcgtgaa gaagtccaag ctgcactggt gcaacaacgt ccccgacatc
661 ttcatcatca acctctcggt agtagatctc ctctttctcc tgggcatgcc cttcatgatc
721 caccagctca tgggcaatgg ggtgtggcac tttggggaga ccatgtgcac cctcatcacg
781 gccatggatg ccaatagtca gttcaccagc acctacatcc tgaccgccat ggccattgac
841 cgctacctgg ccactgtcca ccccatctct tccacgaagt tccggaagcc ctctgtggcc
901 accctggtga tctgcctcct gtgggccctc tccttcatca gcatcacccc tgtgtggctg
961 tatgccagac tcatcccctt cccaggaggt gcagtgggct gcggcatacg cctgcccaac
1021 ccagacactg acctctactg gttcaccctg taccagtttt tcctggcctt tgccctgcct
1081 tttgtggtca tcacagccgc atacgtgagg atcctgcagc gcatgacgtc ctcagtggcc
1141 cccgcctccc agcgcagcat ccggctgcgg acaaagaggg tgacccgcac agccatcgcc
1201 atctgtctgg tcttctttgt gtgctgggca ccctactatg tgctacagct gacccagttg
1261 tccatcagcc gcccgaccct cacctttgtc tacttataca atgcggccat cagcttgggc
1321 tatgccaaca gctgcctcaa cccctttgtg tacatcgtgc tctgtgagac gttccgcaaa
1381 cgcttggtcc tgtcggtgaa gcctgcagcc caggggcagc ttcgcgctgt cagcaacgct
1441 cagacggctg acgaggagag gacagaaagc aaaggcacct gatacttccc ctgccaccct
1501 gcacacctcc aagtcagggc accacaacac gccaccggga gagatgctga gaaaaaccca
1561 agaccgctcg ggaaatgcag gaaggccggg ttgtgagggg ttgttgcaat gaaataaata
1621 cattccatgg ggctcacacg ttgctgggga ggcctggagt caggtttggg gttttcagat
1681 atcagaaatc cccttggggg agcaggatga gacctttgga tagaacagaa gctgagcaag
1741 agaacatgtt ggtttggata accggttgca ctatatctgt gagctctcaa atgtcttctt
1801 cccaaggcaa gaggtggaag ggtactgact gggtttgttt aaagtcaggc agggctggag
1861 tgagcagcca gggccatgtt gcacaaggcc tgagagacgg gaaagggccc gatcgctctt
1921 tcccgcctct cactggtgcg atggaaggtg gcctttctcc caagctggtg gataatgaaa
1981 aataaagcac cttctcccta aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
2041 aa
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