LOCUS BC021140 1610 bp mRNA linear HUM 30-MAR-2004
DEFINITION Homo sapiens chromosome 10 open reading frame 90, mRNA (cDNA clone
IMAGE:4871932), partial cds.
ACCESSION BC021140
VERSION BC021140.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1610)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1610)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (03-JAN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Steve Jones, Sarah Barber, Mabel Brown-John, Yaron Butterfield,
Andy Chan, Steve S. Chand, William Chow, Alison Cloutier, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Amara Masson, Mike R. Mayo, Josh Moran, Ryan Morin,
Teika Olson, Diana Palmquist, Anca Petrescu, Anna Liisa Prahbu,
Parvaneh Saeedi, JR Santos, Angelique Schnerch, Ursula Skalska,
Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie
Schein, Asim Siddiqui, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 40 Row: l Column: 16
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis.
FEATURES Location/Qualifiers
source 1..1610
/db_xref="H-InvDB:HIT000090380"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4871932"
/tissue_type="Skin, melanotic melanoma, high MDR."
/clone_lib="NIH_MGC_49"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..1610
/gene="C10orf90"
/gene_synonym="bA422P15.2"
/gene_synonym="FLJ32938"
/db_xref="GeneID:118611"
CDS <1..735
/gene="C10orf90"
/gene_synonym="bA422P15.2"
/gene_synonym="FLJ32938"
/codon_start=1
/product="C10orf90 protein"
/protein_id="AAH21140.1"
/db_xref="GeneID:118611"
/translation="PSDDCLSRDLSEPTERRHQSFLKPRILFPGFLCPLQDVCASLQE
DNGVQIESKFPKGDYTCCDLVVKIKECKKSEDPTTPEPSPAAPSPAPRDGAGSPGLSE
DCSESQQTPARSLTLQEALEVRKPQFISRSQERLKKLEHMVQQRKAQRKEDLRQKQSL
LPIRTSKKQFTIPHPLSDNLFKPKERCISEKEMHMRSKRIYDNLPEVKKKKEEQRKRV
ILQSNRLRAEVFKKQLLDQLLQRNAV"
BASE COUNT 493 a 397 c 318 g 402 t
ORIGIN
1 ccaagcgatg actgtctgtc tagagacctt tctgagccca cagagagacg acatcaaagc
61 ttcctgaaac ccagaatcct ttttcctggg tttctttgcc ccttacaaga tgtatgtgca
121 tctctgcagg aagacaatgg tgttcagata gaaagcaagt tccccaaagg agattacaca
181 tgctgtgact tggttgtaaa aataaaggaa tgtaagaaga gtgaggaccc caccacacct
241 gagccctccc cagcagcacc ctcgccagca ccccgcgatg gagcagggag ccctggcctg
301 tccgaagact gttctgagtc tcagcaaacg cctgcaagat ctttgacctt gcaagaagca
361 ctggaagttc gtaagcctca gttcatttct cgctcacaag aacggctgaa gaagcttgaa
421 cacatggtcc agcagaggaa agcccagcgg aaggaggacc tgaggcagaa gcagagcctc
481 cttcccatcc gcaccagcaa gaagcagttc acgattcccc atcctctgag tgataacttg
541 ttcaaaccca aagaacggtg catttcagag aaggagatgc atatgcgatc taagagaatc
601 tatgataact tgccggaagt taaaaagaaa aaagaagaac aaaggaaaag ggtgatctta
661 caaagtaaca gactccgtgc cgaagtcttc aaaaagcaat tactggacca gctccttcaa
721 aggaatgcgg tctaaccaca ggctgccctg ctgaccacac tacctggacc tgggaggact
781 tcgaatgctg gataagccat taaacttagc attatcttca tcatgggaaa acacttattt
841 tactttcgat ttttttttcc ataaaggaaa acatcacttc ctgaattact gacccaagcc
901 aaacagaaac aataaccctc gagaaaatag gtcaacaatc tgttgtgggg aaaccacctc
961 catgtaaccc actggataca gtccccttaa tgtttttgct tctaaattgt accttttgct
1021 tctgatttct tctcccctgc tgtttcctgc ccatcagaga ggcctgatac aagcaagttt
1081 gtttacatcc ctggggaatc ttttacatca aacttttggg atccaaatcc atctcctttt
1141 aaatttcaat ctcagcacct gccagttatg caaatgccaa aatgtgggtc atcatatagt
1201 atatttgaaa cctttctgaa catgtacacc acccaatgct agaggctgac ttggaaaccg
1261 gtgggtgcaa tgcccgaggc tgtggaacaa tcagcccatc tctttgtgac ctggagcagt
1321 cagagggccc tcagtcaccc cgccccattc ctcaccagag aaaagaagcc atttctatgg
1381 aagctctgac gtaacttcag tgttttctac aatactcctc ctgccccgcc ccattaaaac
1441 agttcttttg ttaagaaata gcctaatggt ccaactttgc tgtctgttct tccaaatgtt
1501 tataatacac attatttata aatatgtctg tttgggaagc taagaacaag ctagttttta
1561 caacacaaat ggaaataaat gcaattatta taaaaaaaaa aaaaaaaaaa
//