LOCUS BC021137 3165 bp mRNA linear HUM 11-AUG-2006 DEFINITION Homo sapiens sec1 family domain containing 2, mRNA (cDNA clone MGC:32058 IMAGE:4866354), complete cds. ACCESSION BC021137 VERSION BC021137.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3165) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 3165) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (03-JAN-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 40 Row: j Column: 6 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 40255253. FEATURES Location/Qualifiers source 1..3165 /db_xref="H-InvDB:HIT000090379" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:32058 IMAGE:4866354" /tissue_type="Colon, adenocarcinoma" /clone_lib="NIH_MGC_15" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..3165 /gene="SCFD2" /gene_synonym="FLJ39514" /gene_synonym="STXBP1L1" /db_xref="GeneID:152579" /db_xref="HGNC:HGNC:30676" CDS 92..2146 /gene="SCFD2" /gene_synonym="FLJ39514" /gene_synonym="STXBP1L1" /codon_start=1 /product="sec1 family domain containing 2" /protein_id="AAH21137.2" /db_xref="GeneID:152579" /db_xref="HGNC:HGNC:30676" /translation="MSASGVLSFTQQGWEQVLAKVKRAVVYLDAACAESLHWGCGSTR LLEAVGGPDCHLREFEPDAIGGGAKQPKAVFVLSCLLKGRTVEILRDIICRSHFQYCV VVTTVSHAVHLTANHVPAAAAAEMEGQQPVFEQLEEKLCEWMGNMNYTAEVFHVPLLL APVAPHFALTPAFASLFPLLPQDVHLLNSARPDKRKLGSLGDVDSTTLTPELLLQIRC LVSGLSSLCEHLGVREECFAVGSLSQVIAADLANYAPAKNRKKTAAGRASVVFVDRTL DLTGAVGHHGDNLVEKIISALPQLPGHTNDVMVNMIALTALHTEEENYNVVAPGCLSQ SSDTTAKALWEALLNTKHKEAVMEVRRHLVEAASRENLPIKMSMGRVTPGQLMSYIQL FKNNLKALMNHCGLLQLGLATAQTLKHPQTAKWDNFLAFERLLLQSIGESAMSVVLNQ LLPMIKPVTQRTNEDYSPEELLILLIYIYSVTGELTVDKDLCEAEEKVKKALAQVFCE ESGLSPLLQKITDWDSSINLTFHKSKIAVDELFTSLRDIAGARSLLKQFKSVYVPGNH THQASYKPLLKQVVEEIFHPERPDSVDIEHMSSGLTDLLKTGFSMFMKVSRPHPSDYP LLILFVVGGVTVSEVKMVKDLVASLKPGTQVIVLSTRLLKPLNIPELLFATDRLHPDL GF" BASE COUNT 840 a 737 c 781 g 807 t ORIGIN 1 gtcaaagtct cccggagccc aatttccgga agcggtgagt tctgaaagaa gttcctgcac 61 cgtagtttcc caagtctgcg aatccccaac catgagcgcc tcgggcgtac tgtcctttac 121 ccagcaagga tgggagcagg tgctggccaa agtgaaacgg gctgtggttt acctggacgc 181 cgcctgcgcc gagagcctgc actggggctg cggatccacc cgtctcctgg aggcggtggg 241 gggtcctgac tgtcacctgc gagagttcga gcccgacgca attggtggtg gagccaagca 301 gcccaaggca gtgtttgtgc tgagctgcct gctgaaaggc cggaccgtgg agatcctacg 361 ggacatcatc tgccgcagtc acttccagta ttgtgtggtg gtcacaaccg tgagccacgc 421 tgtccacctc acagctaatc atgtcccagc ggcggcagcg gccgagatgg aggggcagca 481 gccggtgttc gagcagctgg aggagaagct gtgtgaatgg atgggcaaca tgaactacac 541 ggccgaggtg ttccatgtcc cgttattgct tgcccctgtt gctccccact ttgccttgac 601 tccagctttt gcatcccttt tcccactgct accccaggat gtgcacctcc ttaatagcgc 661 ccgaccggac aagaggaagc tgggaagcct gggtgatgtg gactccacta cgctaacccc 721 agagctgctg ctgcagatca gatgcctagt gtcaggcctc agttctctgt gtgaacattt 781 aggagtacgg gaggagtgtt ttgctgtagg ttccttaagt caggtcatcg ctgcggatct 841 ggccaattat gcccctgcaa agaacaggaa gaagactgct gcaggcaggg catcagtggt 901 ttttgtggac agaaccctgg atctcacagg agcagttgga catcatggag acaacttagt 961 agagaagatc atttcagcac ttccccagct cccaggccac acaaatgatg tgatggttaa 1021 catgatagcg ctcactgcac tccatactga ggaggaaaat tataatgtgg ttgcaccagg 1081 ctgtctttca caatccagtg acaccacagc caaagcccta tgggaagctt tactgaacac 1141 taagcacaaa gaggcagtga tggaagttcg gagacatcta gtggaagcgg caagcagaga 1201 aaacctgcca atcaagatga gtatggggag agtcacaccg ggacagctca tgtcctatat 1261 tcagctcttc aagaacaacc tcaaagctct aatgaatcat tgtggcctcc tccagcttgg 1321 actggccaca gctcaaacgt tgaaacaccc acagactgcc aagtgggaca actttctggc 1381 ttttgaaagg ctccttcttc agagcattgg ggagtcagca atgtccgttg tgttaaatca 1441 gctgctgccc atgattaagc ctgtaaccca gagaaccaac gaggactaca gccctgagga 1501 actgctgatc cttctcatat atatttattc tgtcactgga gagctcacgg tagacaaaga 1561 cctgtgtgaa gcagaagaaa aagtcaagaa agcattggct caggtcttct gtgaggaatc 1621 tggattgtca cctttgctgc aaaaaattac ggactgggac tcttcaatta atctgacatt 1681 tcacaaatcc aaaattgccg tggatgaact ctttacttca cttcgggata ttgctggagc 1741 tcggagtctc ctgaaacagt ttaagtctgt atatgttcct ggaaatcata cccaccaggc 1801 atcttataag ccattgttga agcaagttgt ggaggaaata tttcatcccg agaggccaga 1861 ttccgttgat attgaacaca tgtcttcagg cctcactgat ctccttaaaa ctggatttag 1921 catgttcatg aaggtgagcc ggcctcatcc tagtgactac cccctcctga tcctctttgt 1981 ggtaggtggg gtcacagtct ctgaagtgaa aatggtcaaa gatcttgtgg catcgttgaa 2041 gccaggaacc caggtaatcg tgctgtccac acgactcctg aagccactta acattcctga 2101 gctgttattt gcaactgacc gactgcatcc agaccttggc ttctgagcat ccgctaagaa 2161 gataagacct actcaagctg gaaatgccga tgcaattttc tgccaccact ccaaatactc 2221 ctccacaacc agcgtccctg tcactaattg cgagaatgat ggaattctgc ctgaagggtc 2281 ttgataccta ctcagtgagg tactttgctt ggattgctgt gattcttaaa aaaaaaaaaa 2341 aaaagttttt ttattttcct gaaggcgaca gtctgtcttt tggcgagtcc aattagtgat 2401 cgtttccatt tatccttaac cctctgtttg tgatcttcct gattccacct acaagttcat 2461 tagttctaaa taaaagcctg ttggcaagtg ttggtagatt acaactcttt ttatttgaag 2521 ttgctcgaga agttagacat gctttagaat tatgagtgtg gggaaaattt gatgttcctt 2581 aggattatat aactgaggag ggaacattgc aaatagggtc tgaggctttg tttctctctt 2641 gctctgaaac atttctgaaa aggcaaggaa gggagggtta gtgtctgggg cagtgctggt 2701 agcctgcatg tgttgtaaat catcctgcca taacaaagga ctgcattgtt ctagctggcc 2761 cactgggcag gtctgccagg ctacttggaa ctgtagtggg aaggtggttg attggagggt 2821 tatctgtata taaaaggttt tctcccctcc aaagaaagac tccagtacaa gatacctggt 2881 cccagggagt ctaaattgta acagcaaccc ctgtggactt tgtgggtatg agttttgatt 2941 gaaatataaa gctttctttt ctgtaagttt aagttttcca tctgaccata gcagaaaaac 3001 ctagacccac ctagtgaaac tttgtaagaa ctccagggca aaaacgaacc acttgcaacc 3061 cacatgtttg taggtgtatg gtcgatggaa gtttctggca tccatgttgg taataaagag 3121 ataaaactga aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaa //