LOCUS BC021077 2719 bp mRNA linear SYN 02-SEP-2016
DEFINITION Synthetic construct Homo sapiens integrin, beta 2 (complement
component 3 receptor 3 and 4 subunit), mRNA (cDNA clone
IMAGE:3532854), partial cds.
ACCESSION BC021077
VERSION BC021077.1
KEYWORDS .
SOURCE synthetic construct
ORGANISM synthetic construct
other sequences; artificial sequences.
REFERENCE 1 (bases 1 to 2719)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2719)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-JAN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 11 Row: n Column: 15.
FEATURES Location/Qualifiers
source 1..2719
/db_xref="H-InvDB:HIT000258965"
/organism="synthetic construct"
/mol_type="mRNA"
/isolation_source="Homo sapiens; Muscle, rhabdomyosarcoma"
/db_xref="taxon:32630"
/clone="IMAGE:3532854"
/clone_lib="NIH_MGC_17"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..2719
/gene="ITGB2"
/gene_synonym="LAD"
/gene_synonym="LCAMB"
/gene_synonym="LFA-1"
/gene_synonym="MAC-1"
/gene_synonym="MF17"
/db_xref="GeneID:3689"
/db_xref="HGNC:HGNC:6155"
/db_xref="MIM:600065"
CDS <1..2277
/gene="ITGB2"
/gene_synonym="LAD"
/gene_synonym="LCAMB"
/gene_synonym="LFA-1"
/gene_synonym="MAC-1"
/gene_synonym="MF17"
/codon_start=1
/transl_table=11
/product="ITGB2 protein"
/protein_id="AAH21077.1"
/db_xref="GeneID:3689"
/db_xref="HGNC:HGNC:6155"
/db_xref="MIM:600065"
/translation="GTRLSLGCVLSQECTKFKVSSCRECIESGPGCTWCQKLNFTGPG
DPDSIRCDTRPQLLMRGCAADDIMDPTSLAETQEDHNGGQKQLSPQKVTLYLRPGQAA
AFNVTFRRAKGYPIDLYYLMDLSYSMLDDLRNVKKLGGDLLRALNEITESGRIGFGSF
VDKTVLPFVNTHPDKLRNPCPNKEKECQPPFAFRHVLKLTNNSNQFQTEVGKQLISGN
LDAPEGGLDAMMQVAACPEEIGWRNVTRLLVFATDDGFHFAGDGKLGAILTPNDGRCH
LEDNLYKRSNEFDYPSVGQLAHKLAENNIQPIFAVTSRMVKTYEKLTEIIPKSAVGEL
SEDSSNVVHLIKNAYNKLSSRVFLDHNALPDTLKVTYDSFCSNGVTHRNQPRGDCDGV
QINVPITFQVKVTATECIQEQSFVIRALGFTDIVTVQVLPQCECRCRDQSRDRSLCHG
KGFLECGICRCDTGYIGKNCECQTQGRSSQELEGSCRKDNNSIICSGLGDCVCGQCLC
HTSDVPGKLIYGQYCECDTINCERYNGQVCGGPGRGLCFCGKCRCHPGFEGSACQCER
TTEGCLNPRRVECSGRGRCRCNVCECHSGYQLPLCQECPGCPSPCGKYISCAECLKFE
KGPFGKNCSAACPGLQLSNNPVKGRTCKERDSEGCWVAYTLEQQDGMDRYLIYVDESR
ECVAGPNIAAIVGGTVAGIVLIGILLLVIWKALIHLSDLREYRRFEKEKLKSQWNNDN
PLFKSATTTVMNPKFAES"
BASE COUNT 607 a 786 c 812 g 514 t
ORIGIN
1 ggcacgaggc tctccctcgg gtgcgtcctc tctcaggagt gcacgaagtt caaggtcagc
61 agctgccggg aatgcatcga gtcggggccc ggctgcacct ggtgccagaa gctgaacttc
121 acagggccgg gggatcctga ctccattcgc tgcgacaccc ggccacagct gctcatgagg
181 ggctgtgcgg ctgacgacat catggacccc acaagcctcg ctgaaaccca ggaagaccac
241 aatgggggcc agaagcagct gtccccacaa aaagtgacgc tttacctgcg accaggccag
301 gcagcagcgt tcaacgtgac cttccggcgg gccaagggct accccatcga cctgtactat
361 ctgatggacc tctcctactc catgcttgat gacctcagga atgtcaagaa gctaggtggc
421 gacctgctcc gggccctcaa cgagatcacc gagtccggcc gcattggctt cgggtccttc
481 gtggacaaga ccgtgctgcc gttcgtgaac acgcaccctg ataagctgcg aaacccatgc
541 cccaacaagg agaaagagtg ccagcccccg tttgccttca ggcacgtgct gaagctgacc
601 aacaactcca accagtttca gaccgaggtc gggaagcagc tgatttccgg aaacctggat
661 gcacccgagg gtgggctgga cgccatgatg caggtcgccg cctgcccgga ggaaatcggc
721 tggcgcaacg tcacgcggct gctggtgttt gccactgatg acggcttcca tttcgcgggc
781 gacgggaagc tgggcgccat cctgaccccc aacgacggcc gctgtcacct ggaggacaac
841 ttgtacaaga ggagcaacga attcgactac ccatcggtgg gccagctggc gcacaagctg
901 gctgaaaaca acatccagcc catcttcgcg gtgaccagta ggatggtgaa gacctacgag
961 aaactcaccg agatcatccc caagtcagcc gtgggggagc tgtctgagga ctccagcaat
1021 gtggtccatc tcattaagaa tgcttacaat aaactctcct ccagggtatt cctggatcac
1081 aacgccctcc ccgacaccct gaaagtcacc tacgactcct tctgcagcaa tggagtgacg
1141 cacaggaacc agcccagagg tgactgtgat ggcgtgcaga tcaatgtccc gatcaccttc
1201 caggtgaagg tcacggccac agagtgcatc caggagcagt cgtttgtcat ccgggcgctg
1261 ggcttcacgg acatagtgac cgtgcaggtc cttccccagt gtgagtgccg gtgccgggac
1321 cagagcagag accgcagcct ctgccatggc aagggcttct tggagtgcgg catctgcagg
1381 tgtgacactg gctacattgg gaaaaactgt gagtgccaga cacagggccg gagcagccag
1441 gagctggaag gaagctgccg gaaggacaac aactccatca tctgctcagg gctgggggac
1501 tgtgtctgcg ggcagtgcct gtgccacacc agcgacgtcc ccggcaagct gatatacggg
1561 cagtactgcg agtgtgacac catcaactgt gagcgctaca acggccaggt ctgcggcggc
1621 ccggggaggg ggctctgctt ctgcgggaag tgccgctgcc acccgggctt tgagggctca
1681 gcgtgccagt gcgagaggac cactgagggc tgcctgaacc cgcggcgtgt tgagtgtagt
1741 ggtcgtggcc ggtgccgctg caacgtatgc gagtgccatt caggctacca gctgcctctg
1801 tgccaggagt gccccggctg cccctcaccc tgtggcaagt acatctcctg cgccgagtgc
1861 ctgaagttcg aaaagggccc ctttgggaag aactgcagcg cggcgtgtcc gggcctgcag
1921 ctgtcgaaca accccgtgaa gggcaggacc tgcaaggaga gggactcaga gggctgctgg
1981 gtggcctaca cgctggagca gcaggacggg atggaccgct acctcatcta tgtggatgag
2041 agccgagagt gtgtggcagg ccccaacatc gccgccatcg tcgggggcac cgtggcaggc
2101 atcgtgctga tcggcattct cctgctggtc atctggaagg ctctgatcca cctgagcgac
2161 ctccgggagt acaggcgctt tgagaaggag aagctcaagt cccagtggaa caatgataat
2221 ccccttttca agagcgccac cacgacggtc atgaacccca agtttgctga gagttaggag
2281 cacttggtga agacaaggcc gtcaggaccc accatgtctg ccccatcacg cggccgagac
2341 atggcttgcc acagctcttg aggatgtcac caattaacca gaaatccagt tattttccac
2401 cctcaaaatg acagccatgg ccggccgggt gcttctgggg gctcgtcggg gggacagctc
2461 cactctgact ggcacagtct ttgcatggag acttgaggag ggagggcttg aggttggtga
2521 ggttaggtgc gtgtttcctg tgcaagtcag gacatcagtc tgattaaagg tggtgccaat
2581 ttatttacat ttaaacttgt cagggtataa aatgacatcc cattaattat attgttaatc
2641 aatcacgtgt atagaaaaaa aaaaaaaaaa aaaaaaactc gagactagtt ctctctctct
2701 ctgcttgcca cagctcttg
//