LOCUS BC020987 2974 bp mRNA linear HUM 12-JAN-2007
DEFINITION Homo sapiens SREBF chaperone, mRNA (cDNA clone MGC:9728
IMAGE:3852258), complete cds.
ACCESSION BC020987
VERSION BC020987.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2974)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2974)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-JAN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 20 Row: o Column: 1
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 66932901.
FEATURES Location/Qualifiers
source 1..2974
/db_xref="H-InvDB:HIT000039070"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:9728 IMAGE:3852258"
/tissue_type="Colon, adenocarcinoma"
/clone_lib="NIH_MGC_65"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2974
/gene="SCAP"
/db_xref="GeneID:22937"
/db_xref="HGNC:HGNC:30634"
/db_xref="MIM:601510"
CDS 100..2817
/gene="SCAP"
/codon_start=1
/product="SCAP protein"
/protein_id="AAH20987.1"
/db_xref="GeneID:22937"
/db_xref="HGNC:HGNC:30634"
/db_xref="MIM:601510"
/translation="MTLTERLREKISRAFYNHGLLCASYPIPIILIGYFTLVPAIQEF
CLFAVVGLVSDFFLQMLFFTTVLSIDIRRMELADLNKRLPPEACLPSAKPVGQPTRYE
RQLAVRPSTPHTITLQPSSFRNLRLPKRLRVVYFLARTRLAQRLIMAGTVVWIGILVY
TDPAGLRNYLAAQVTEQSPLGEGALAPMPVPSGMLPPSHPDPAFSIFPPDAPKLPENQ
TSPGESPERGGPAEVVHDSPVPEVTWGPEDEELWRKLSFRHWPTLFSYYNITLAKRYI
SLLPVIPVTLRLNPREALEGRHPQDGRSAWPPPGPIPAGHWEAGPKGPGGVQAHGDVT
LYKVAALGLATGIVLVLLLLCLYRVLCPRNYGQLGGGPGRRRRGELPCDDYGYAPPET
EIVPLVLRGHLMDIECLASDGMLLVSCCLAGHICVWDAQTGDCLTRIPRPGQRRDSGV
GSGLEAQESWERLSDGGKAGPEEPGDSPPLRHRPRGPPPPSLFGDQPDLTCLIDTNFS
AQPRSSQPTQPEPRHRAVCGRSRDSPGYDFSCLVQRVYQEEGLAAVCTPALRPPSPGP
VLSQAPEDEGGSPEKGSPSLAWAPSAEGSIWSLELQGNLIVVGRSSGRLEVWDAIEGV
LCCSSEEVSSGITALVFLDKRIVAARLNGSLDFFSLETHTALSPLQFRGTPGRGSSPA
SPVYSSSDTVACHLTHTVPCAHQKPITALKAAAGRLVTGSQDHTLRVFRLEDSCCLFT
LQGHSGAITTVYIDQTMVLASGGQDGAICLWDVLTGSRVSHVFAHRGDVTSLTCTTSC
VISSGLDDLISIWDRSTGIKFYSIQQDLGCGASLGVISDNLLVTGGQGCVSFWDLNYG
DLLQTVYLGKNSEAQPARQILVLDNAAIVCNFGSELSLVYVPSVLEKLD"
BASE COUNT 531 a 957 c 903 g 583 t
ORIGIN
1 ggtacctgca catgttgttc tttgtcagtg ctgtcaagtg tgtgccaggg tgatccatgg
61 tcactttccg ggatggcagc aaggtgactt cggctgagga tgaccctgac tgaaaggctg
121 cgtgagaaga tatctcgggc cttctacaac catgggctcc tctgtgcatc ctatcccatc
181 cccatcatcc tcatcggcta cttcacccta gtgcccgcca tccaggagtt ctgtctcttt
241 gctgtcgtgg ggctggtgtc tgacttcttc cttcagatgc tgtttttcac cactgtcctg
301 tccattgaca ttcgccggat ggagctagca gacctgaaca agcgactgcc ccctgaggcc
361 tgcctgccct cagccaagcc agtggggcag ccaacgcgct acgagcggca gctggctgtg
421 aggccgtcca caccccacac catcacgttg cagccgtctt ccttccgaaa cctgcggctc
481 cccaagaggc tgcgtgttgt ctacttcctg gcccgcaccc gcctggcaca gcgcctcatc
541 atggctggca ccgttgtctg gattggcatc ctggtataca cagacccagc agggctgcgc
601 aactacctcg ctgcccaggt gacggaacag agcccattgg gtgagggagc cctggctccc
661 atgcccgtgc ctagtggcat gctgcccccc agccacccgg accctgcctt ctccatcttc
721 ccacctgatg cccctaagct acctgagaac cagacgtcgc caggcgagtc acctgagcgt
781 ggaggtccag cagaggttgt ccatgacagc ccagtcccag aggtaacctg ggggcctgag
841 gatgaggaac tttggaggaa attgtccttc cgccactggc cgacgctctt cagctattac
901 aacatcacac tggccaagag gtacatcagc ctgctgcccg tcatcccagt cacgctccgc
961 ctgaacccga gggaggctct ggagggccgg caccctcagg acggccgcag tgcctggccc
1021 ccaccggggc ccatacctgc tgggcactgg gaagcaggac ccaagggccc aggtggggtg
1081 caggcccatg gagacgtcac gctgtacaag gtggcggcgc tgggcctggc caccggcatc
1141 gtcttggtgc tgctgctgct ctgcctctac cgcgtgctat gcccgcgcaa ctacgggcag
1201 ctgggtggtg ggcccgggcg gcggaggcgc ggggagctgc cctgcgacga ctacggctat
1261 gcgccacccg agacggagat cgtgccgctt gtgctgcgcg gccacctcat ggacatcgag
1321 tgcctggcca gcgacggcat gctgctggtg agctgctgcc tggcaggcca catctgcgtg
1381 tgggacgcgc agaccgggga ttgcctaacg cgcattccgc gcccagggca gcgccgggac
1441 agtggcgtgg gcagcgggct tgaggctcag gagagctggg aacgactttc agatggtggg
1501 aaggctggtc cagaggagcc tggggacagc cctcccctga gacaccgccc ccggggccct
1561 ccgccgcctt ccctcttcgg ggaccagcct gacctcacct gcttaattga caccaacttt
1621 tcagcgcagc ctcggtcctc acagcccact cagcccgagc cccggcaccg ggcggtctgt
1681 ggccgctctc gggactcccc aggctatgac ttcagctgcc tggtgcagcg ggtgtaccag
1741 gaggaggggc tggcggccgt ctgcacacca gccctgcgcc caccctcgcc tgggccggtg
1801 ctgtcccagg cccctgagga cgagggtggc tcccccgaga aaggctcccc ttccctcgcc
1861 tgggccccca gtgccgaggg ttccatctgg agcttggagc tgcagggcaa cctcatcgtg
1921 gtggggcgga gcagcggccg gctggaggtg tgggacgcca ttgaaggggt gctgtgctgc
1981 agcagcgagg aggtctcctc aggcattacc gctctggtgt tcttggacaa aaggattgtg
2041 gctgcacggc tcaacggttc ccttgatttc ttctccttgg agacccacac tgccctcagc
2101 cccctgcagt ttagagggac cccagggcgg ggcagttccc ctgcctctcc agtgtacagc
2161 agcagcgaca cagtggcctg tcacctgacc cacacagtgc cctgtgcaca ccaaaaaccc
2221 atcacagccc tgaaagccgc tgctgggcgc ttggtgactg ggagccaaga ccacacactg
2281 agagtgttcc gtctggagga ctcgtgctgc ctcttcaccc ttcagggcca ctcaggggcc
2341 atcacgaccg tgtacattga ccagaccatg gtgctggcca gtggaggaca agatggggcc
2401 atctgcctgt gggatgtact gactggcagc cgggtcagcc atgtgtttgc tcaccgtggg
2461 gatgtcacct cccttacctg taccacctcc tgtgtcatca gcagtggcct ggatgacctc
2521 atcagcatct gggaccgcag cacaggcatc aagttctact ccattcagca ggacctgggc
2581 tgtggtgcaa gcttgggtgt catctcagac aacctgctgg tgactggcgg ccagggctgt
2641 gtctcctttt gggacctaaa ctacggggac ctgttacaga cagtctacct ggggaagaac
2701 agtgaggccc agcctgcccg ccagatcctg gtgctggaca acgctgccat tgtctgcaac
2761 tttggcagtg agctcagcct ggtgtatgtg ccctctgtgc tggagaagct ggactgagcg
2821 cagggcctcc ttgcccaggc aggaggctgg ggtgctgtgt gggggccaat gcactgaacc
2881 tggacttggg ggaaagagcc gagtatcttc cagccgctgc ctcctgactg taataatatt
2941 aaactttttt aaaaaaccaa aaaaaaaaaa aaaa
//