LOCUS BC020986 2095 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens peptidylprolyl isomerase (cyclophilin)-like 4, mRNA
(cDNA clone MGC:9727 IMAGE:3852013), complete cds.
ACCESSION BC020986
VERSION BC020986.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2095)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2095)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-JAN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 20 Row: n Column: 6
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis, Similarity but not identity to protein.
FEATURES Location/Qualifiers
source 1..2095
/db_xref="H-InvDB:HIT000039069"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:9727 IMAGE:3852013"
/tissue_type="Colon, adenocarcinoma"
/clone_lib="NIH_MGC_65"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2095
/gene="PPIL4"
/gene_synonym="HDCME13P"
/db_xref="GeneID:85313"
/db_xref="HGNC:HGNC:15702"
/db_xref="MIM:607609"
CDS 34..1512
/gene="PPIL4"
/gene_synonym="HDCME13P"
/codon_start=1
/product="peptidylprolyl isomerase (cyclophilin)-like 4"
/protein_id="AAH20986.1"
/db_xref="GeneID:85313"
/db_xref="HGNC:HGNC:15702"
/db_xref="MIM:607609"
/translation="MAVLLETTLGDVVIDLYTEERPRACLNFLKLCKIKYYNYCLIHN
VQRDFIIQTGDPTGTGRGGESIFGQLYGDQASFFEAEKVPRIKHKKKGTVSMVNNGSD
QHGSQFLITTGENLDYLDGVHTVFGEVTEGMDIIKKINETFVDKDFVPYQDIRINHTV
ILDDPFDDPPDLLIPDRSPEPTREQLDSGRIGADEEIDDFKGRSAEEVEEIKAEKEAK
TQAILLEMVGDLPDADIKPPENVLFVCKLNPVTTDEDLEIIFSRFGPIRSCEVIRDWK
TGESLCYAFIEFEKEEDCEKAFFKMDNVLIDDRRIHVDFSQSVAKVKWKGKGGKYTKS
DFKEYEKEQDKPPNLVLKDKVKPKQDTKYDLILDEQAEDSKSSHSHTSKKHKKKTHHC
SEEKEDEDYMPIKNTNQDIYREMGFGHYEEEESCWEKQKSEKRDRTQNRSRSRSRERD
GHYSNSHKSKYQTDLYERERSKKRDRSRSPKKSKDKEKSKYR"
BASE COUNT 784 a 309 c 445 g 557 t
ORIGIN
1 cccggggttt gtagcggagg aggagcgggc gccatggcgg ttctactgga gaccacttta
61 ggcgacgtcg tcatcgactt gtacaccgaa gaacggccgc gtgcctgctt gaatttcttg
121 aaactgtgca aaataaaata ttacaattat tgccttattc acaatgtaca gagggatttt
181 atcatacaaa ctggcgatcc tacagggact ggccgtggag gagagtctat ctttggccaa
241 ctgtatggtg atcaagcaag cttttttgag gcagaaaaag tcccaagaat taagcacaag
301 aagaaaggca cagtgtccat ggtgaataat ggcagtgatc aacatggatc tcagtttctt
361 atcaccacag gagaaaatct agattatctt gatggtgtcc atacggtgtt tggtgaggtg
421 acagaaggca tggacataat taagaaaatt aatgagacct ttgttgacaa ggactttgta
481 ccatatcagg atatcaggat aaatcatacg gtgattttag atgatccatt tgatgaccct
541 cctgatttat taatccctga tcgatcacca gaacctacaa gggaacaatt agatagtggt
601 cgaataggag cagatgaaga aattgatgat ttcaaaggaa gatcagctga ggaagtagaa
661 gaaataaagg cagaaaaaga ggctaaaact caggctatac ttttggagat ggtgggagac
721 ctacctgatg cagatattaa acctccagaa aatgtactgt ttgtgtgtaa attgaaccca
781 gtgaccacag atgaggatct ggaaataata ttctctagat ttgggccaat aagaagttgt
841 gaagttatcc gagactggaa gacaggagag tccctctgtt acgcttttat tgaatttgaa
901 aaggaagaag attgtgagaa agcattcttc aaaatggaca atgtgcttat agatgacaga
961 agaatacatg tggattttag ccagtcggtt gcaaaggtta aatggaaagg aaaaggtggg
1021 aaatacacca agagtgattt caaggagtat gaaaaagaac aggataaacc acctaatttg
1081 gttctgaaag ataaagtaaa gcccaaacag gatacaaaat acgatcttat attagatgag
1141 caggccgaag actcaaaatc aagtcactca cacacaagta aaaaacacaa gaagaaaacc
1201 catcactgtt ctgaagagaa agaagatgag gactacatgc caatcaaaaa tactaatcag
1261 gatatctata gagaaatggg gtttggtcac tatgaagaag aagaaagctg ttgggagaaa
1321 caaaagagtg aaaagagaga ccgaactcag aaccgaagtc gtagccgatc tcgagagagg
1381 gatggccatt atagtaatag tcataaatca aaataccaaa cagatcttta tgaaagagaa
1441 aggagtaaaa agagagaccg aagcagaagt ccaaagaagt ccaaagataa agaaaaatct
1501 aagtatagat gaaagatgaa gaggcagaat tgagaggcta acatatttac tcttgtctaa
1561 cttaagagtg ccaggaaagc agatgcttag attttgtgtc aaagcttgtt atttttttca
1621 tactaggatt atggtcttta gattaatact gattatatag agcacggaaa gataaagaat
1681 tgaacatttt ctttgtatac ttttttacac taattttatt gttatacata aatggtagtc
1741 ttcatttttg aagtcttaca ttttcactct ttttttaatg aagtatttca tactacaaaa
1801 atacataaac gtatatataa agggataata aatgtaaata tctgtgtact catcagccag
1861 cttaagatac agatgttgtc gacattttag aagttcccta aggccctctc cctctcaaat
1921 aattatttgg aattttgtgt ttgtcatttg tctattatag ttttacaaca tacgtatgta
1981 tctgtaagtg aaatgttaat tttgtatgtt tctgaatttt atataaatgg caaaatgttt
2041 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaa
//