LOCUS BC020976 2128 bp mRNA linear HUM 11-AUG-2006
DEFINITION Homo sapiens TBC1 domain family, member 22A, mRNA (cDNA clone
MGC:9583 IMAGE:3884347), complete cds.
ACCESSION BC020976
VERSION BC020976.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2128)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2128)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-JAN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP/Gazdar
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 22 Row: b Column: 14
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 22507408.
FEATURES Location/Qualifiers
source 1..2128
/db_xref="H-InvDB:HIT000039063"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:9583 IMAGE:3884347"
/tissue_type="Lung, large cell carcinoma"
/clone_lib="NIH_MGC_68"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2128
/gene="TBC1D22A"
/gene_synonym="HSC79E021"
/db_xref="GeneID:25771"
/db_xref="HGNC:HGNC:1309"
CDS 106..1659
/gene="TBC1D22A"
/gene_synonym="HSC79E021"
/codon_start=1
/product="TBC1 domain family, member 22A"
/protein_id="AAH20976.2"
/db_xref="GeneID:25771"
/db_xref="HGNC:HGNC:1309"
/translation="MASDGARKQFWKRSNSKLPGSIQHVYGAQHPPFDPLLHGTLLRS
TAKMPTTPVKAKRVSTFQEFESNTSDAWDAGEDDDELLAMAAESLNSEVVMETANRVL
RNHSQRQGRPTLQEGPGLQQKPRPEAEPPSPPSGDLRLVKSVSESHTSCPAESASDAA
PLQRSQSLPHSATVTLGGTSDPSTLSSSALSEREASRLDKFKQLLAGPNTDLEELRRL
SWSGIPKPVRPMTWKLLSGYLPANVDRRPATLQRKQKEYFAFIEHYYDSRNDEVHQDT
YRQIHIDIPRMSPEALILQPKVTEIFERILFIWAIRHPASGYVQGINDLVTPFFVVFI
CEYIEAEEVDTVDVSGVPAEVLCNIEADTYWCMSKLLDGIQDNYTFAQPGIQMKVKML
EELVSRIDEQVHRHLDQHEVRYLQFAFRWMNNLLMREVPLRCTIRLWDTYQSEPDGFS
HFHLYVCAAFLVRWRKEILEEKDFQELLLFLQNLPTAHWDDEDISLLLAEAYRLKFAF
ADAPNHYKK"
BASE COUNT 487 a 618 c 627 g 396 t
ORIGIN
1 ccgggagcag tgaggggcca cccggggcac aggaaagggc cgctagggga gggccgggtg
61 cactcggggt gtctgggccg cgggtctgag ggatgaggag gggccatggc cagcgacggg
121 gccaggaagc aattctggaa gcgcagcaac agcaagctcc cgggcagcat ccagcacgtg
181 tatggtgccc agcacccccc ctttgatcca ctgttacatg gcactttgct caggtccacg
241 gccaagatgc cgaccacacc agtgaaggcc aagagggtca gcaccttcca ggagtttgag
301 agcaatacca gcgatgcctg ggacgctggg gaggacgacg atgagctcct ggccatggcg
361 gcggagagcc tgaactccga ggtggtcatg gagacggcca accgtgtgct gcgtaaccac
421 agccagcggc aggggcggcc cacgctgcag gaggggccag ggcttcagca gaagcccagg
481 cccgaggcag agccgccctc accccccagc ggcgacctcc ggctggtgaa gtcggtcagt
541 gagagccaca cgtcctgtcc tgcagaaagt gccagcgatg ccgcccctct gcagaggtcc
601 cagtctctcc cacactcggc caccgtcacg ctgggtggca catctgaccc cagcactctc
661 agcagctcag cgctgagcga aagagaggcc tcccggctcg acaagttcaa gcagctgctt
721 gccggcccca acacggacct tgaggaatta cggaggttga gctggtccgg aatccctaag
781 ccagtgcgtc caatgacgtg gaagctcctc tcaggttacc ttcccgccaa tgtagaccgg
841 agaccagcca ctctccagag aaaacaaaaa gaatattttg catttattga gcactattac
901 gattctagga acgacgaagt tcaccaggac acatacaggc agatccacat agacatccct
961 cgcatgagcc ctgaagcgtt gatcctgcag cccaaggtga cggagatttt tgaaaggatc
1021 ttgttcatat gggcgatccg ccacccagcc agtggatacg ttcagggtat aaatgatctc
1081 gtcactcctt tctttgtggt cttcatttgt gaatacatag aggcagagga ggtggacacg
1141 gtggacgtct ccggcgtgcc cgcagaggtg ctgtgcaaca tcgaggccga cacctactgg
1201 tgcatgagca agctgctgga tggcattcag gacaactaca cctttgccca acctgggatt
1261 caaatgaaag tgaaaatgtt agaagaactc gtgagccgga ttgatgagca agtgcaccgg
1321 cacctggacc aacacgaagt gagatacctg cagtttgcct tccgctggat gaacaacctg
1381 ctgatgaggg aggtgcccct gcgttgtacc atccgcctgt gggacaccta ccagtctgaa
1441 ccggacggct tttctcattt ccacttgtac gtgtgcgctg cttttctcgt gagatggagg
1501 aaggaaatac tagaagaaaa agattttcaa gagctgctgc tcttcctcca gaacctgccc
1561 acagcccact gggatgatga ggacatcagc ctgttgctgg ccgaggccta ccgcctcaag
1621 tttgcttttg ccgacgcccc caatcactac aagaaatgag cccaggccca cccgcagctg
1681 gcctcactgt cccgggtggc gcgccccacc tgcctggctg gtggtaggcc cctgtgagct
1741 ggtcccgggc tgctaaaagg ccttgtgagg tggccccacc ctccagggga gctggtgaag
1801 atgggccaca gacctggtct agggctgaca aagacaggga cagcctttgt tttctgagat
1861 accaaagaga gccaggggag ggccccgggt tcggcggcca gaggcaggtc aggggtcccc
1921 tctccctctc cctgcaatgt ccttgccaaa tgactgcctc ctgctgcccc tagtccgggg
1981 cagcctagga ggcccaccct ctttggagtc ctgctgtctg ggtgccaggg ccggaacgag
2041 gtagtggcca tctcatacct actctgaaat gcaaaacttc tattctgttg agtgaaagaa
2101 taaaatgtag acaaaaaaaa aaaaaaaa
//