LOCUS BC020964 2340 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens ring finger protein 11, mRNA (cDNA clone MGC:8915
IMAGE:3917224), complete cds.
ACCESSION BC020964
VERSION BC020964.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2340)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2340)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-JAN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 25, 2003 this sequence version replaced BC020964.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 22 Row: p Column: 3
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 34452682.
FEATURES Location/Qualifiers
source 1..2340
/db_xref="H-InvDB:HIT000039051"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:8915 IMAGE:3917224"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_72"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2340
/gene="RNF11"
/gene_synonym="CGI-123"
/gene_synonym="MGC51169"
/gene_synonym="SID1669"
/db_xref="GeneID:26994"
/db_xref="HGNC:HGNC:10056"
CDS 80..544
/gene="RNF11"
/gene_synonym="CGI-123"
/gene_synonym="MGC51169"
/gene_synonym="SID1669"
/codon_start=1
/product="ring finger protein 11"
/protein_id="AAH20964.1"
/db_xref="GeneID:26994"
/db_xref="HGNC:HGNC:10056"
/translation="MGNCLKSPTSDDISLLHESQSDRASFGEGTEPDQEPPPPYQEQV
PVPVYHPTPSQTRLATQLTEEEQIRIAQRIGLIQHLPKGVYDPGRDGSEKKIRECVIC
MMDFVYGDPIRFLPCMHIYHLDCIDDWLMRSFTCPSCMEPVDAALLSSYETN"
BASE COUNT 708 a 412 c 459 g 761 t
ORIGIN
1 ccgaggcgga ccgcggagtg tgcgaacgac cccaccgctg ctttctcctc ccccagatca
61 cgcaccccag ctccggaaga tggggaactg cctcaaatcc cccacctcgg atgacatctc
121 cctgcttcac gagtctcagt ccgaccgggc tagctttggc gaggggacgg agccggatca
181 ggagccgccg ccgccatatc aggaacaagt tccagttcca gtctaccacc caacacctag
241 ccagactcgg ctagcaactc agctgactga agaggaacaa attaggatag ctcaaagaat
301 aggtcttata caacatctgc ctaaaggagt ttatgaccct ggaagagatg gatcagaaaa
361 aaagatccgg gagtgtgtga tctgtatgat ggactttgtt tatggggacc caattcgatt
421 tctgccgtgc atgcacatct atcacctgga ctgtatagat gactggttga tgagatcctt
481 cacgtgcccc tcctgcatgg agccagttga tgcagcactg ctttcatcct atgagactaa
541 ttgagccagg gtctcttatc tgacttcaag tgaaccacca ttttggtggt tttgatcttt
601 tgtcactgag cccaaagagc cagggattag gaattaagat cgtgcacaaa agtttcctta
661 aaattcctgg atggctgcag atgttggggg aaaaagtacg tgatatttta gaaacttagt
721 gggaaaagta ggatggtatt tttatgtaaa gccttgaccc aatgtttaaa aatataattg
781 tatttagatc ttgttattgc tccagtacat aggaattgtg taaagtgtta acagcagctg
841 tatttgttta aattgtgtgt attgaagatt aggaaaaaga tagtagttat ttttcctaaa
901 tgaaataact ttcttctctt ccccttcccc acccgaattc ttttctgaag ttgctggcat
961 ttgggtcaag gttttattaa aagctacatt ttataacact ggcacacaca aaaaagtagt
1021 tttaagcttg tttgcacagt tctttttttc cattggaaat ggaattcatt gccttaggtc
1081 tttttaaata gtgtattatt atcgttgggg ctggctctat gcttgaaaac cagtttattt
1141 ataacctgtt ataagtgcta tattctgttt gcagttagga aatgcagaat tcaaagtgat
1201 ctcctagctt gtaagcaaac tgagatgcac tatccctttt ctataaaaaa taagttaatg
1261 tgtcaagaaa ccaactctat taaggtgggg tttaatatta ccctttccta tgtgttttat
1321 ctaattattt tggttgttaa tatggtgata atggaaagtc aagttaaatt ttaaatatta
1381 agaattctga tttattgaga ttgaattatg ccaccacgtt tatgtaaaaa tgaaggtggc
1441 accgtggtga gacctaatga gaaatagtta ctcagttgta aaaattttga tttattctct
1501 ttcttctgac ctccttgcct cttgtcttga accatagcaa aaggatactg catctctcat
1561 tactgtagtg ctgaggttat tgaagttata caaaacacat ctcagtctct gtttcttgga
1621 aaggtatcta ttacatcctg ctagctgact gacaaaacta agcagggaga ataaagataa
1681 ttgtatttta tgttttgcac acaaacgcag aatttgtata accatatgac ttcatagttg
1741 tgatctcaaa aaagaaggaa tttctccttt gtttcttgca gttaatgtaa gaatacttta
1801 aatctctaag cttctgaagt gttagaggta gagatggtct agtaaagatg tagtagtaat
1861 gttttatcca tttagcatgt gtttattttt tcatatgtac tcaaaggtga cttattggtt
1921 cacctcagtg atattacagc taaaaaaatc attcattagc aaaaggaaaa gtggtctcaa
1981 cctaacatca gaagtgtttc ttattattat tttatattga gttgaatatt gaactctaac
2041 agtttttcta catacaaaac acagtgtcat gaaggttatt cataattgca ttatagagga
2101 atgtagtatg tcataagtac tttgtaaaga tttgacattc aactgtagta tccatatgtt
2161 gcttaaattt ccttatgagc cccatgatgg aaagacttaa agatgaattt gagaaaaatt
2221 gaaagaaatt agattatcag gttctgttaa attgttacat gtatcttgct taaatttctg
2281 tttattaatt tatatccacc caagtacata aagcaaattt ggaggaaaaa aaaaaaaaaa
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