LOCUS BC020946 1696 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens tubulin, beta, mRNA (cDNA clone MGC:26663
IMAGE:4795692), complete cds.
ACCESSION BC020946
VERSION BC020946.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1696)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1696)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-JAN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 32 Row: e Column: 7
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis, Similarity but not identity to protein.
FEATURES Location/Qualifiers
source 1..1696
/db_xref="H-InvDB:HIT000039037"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:26663 IMAGE:4795692"
/tissue_type="Brain, hypothalamus"
/clone_lib="NIH_MGC_96"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..1696
/gene="TUBB"
/gene_synonym="M40"
/gene_synonym="MGC16435"
/gene_synonym="OK/SW-cl.56"
/gene_synonym="TUBB1"
/gene_synonym="TUBB5"
/db_xref="GeneID:203068"
/db_xref="HGNC:HGNC:20778"
/db_xref="MIM:191130"
CDS 166..1500
/gene="TUBB"
/gene_synonym="M40"
/gene_synonym="MGC16435"
/gene_synonym="OK/SW-cl.56"
/gene_synonym="TUBB1"
/gene_synonym="TUBB5"
/codon_start=1
/product="tubulin, beta"
/protein_id="AAH20946.1"
/db_xref="GeneID:203068"
/db_xref="HGNC:HGNC:20778"
/db_xref="MIM:191130"
/translation="MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQL
DRISVYYNEATGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWA
KGHYTEGAELVDSVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYP
DRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLT
TPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSR
GSQQYRALTVPELTQQVFDAKDMMAACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQ
NKNSSYFVEWIPNNVKTAVCDIPPRGLKMAVTFIGNSTAIQELFKRISEQFTAMFRRK
AFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEEEDFGEEAEEEA"
BASE COUNT 390 a 490 c 424 g 392 t
ORIGIN
1 ctttttctcc atctcagaac cttcctgccg tcgcgtttgc acctcgctgc tccagcctct
61 ggggcgcatt ccaaccttcc agcctgcgac ctgcggagaa aaaaaattac ttattttctt
121 gccccataca taccttgagg cgagcaaaaa aattaaattt taaccatgag ggaaatcgtg
181 cacatccagg ctggtcagtg tggcaaccag atcggtgcca agttctggga ggtgatcagt
241 gatgaacatg gcatcgaccc caccggcacc taccacgggg acagcgacct gcagctggac
301 cgcatctctg tgtactacaa tgaagccaca ggtggcaaat atgttcctcg tgccatcctg
361 gtggatctag aacctgggac catggactct gttcgctcag gtccttttgg ccagatcttt
421 agaccagaca actttgtatt tggtcagtct ggggcaggta acaactgggc caaaggccac
481 tacacagagg gcgccgagct ggttgattct gtcctggatg tggtacggaa ggaggcagag
541 agctgtgact gcctgcaggg cttccagctg acccactcac tgggcggggg cacaggctct
601 ggaatgggca ctctccttat cagcaagatc cgagaagaat accctgatcg catcatgaat
661 accttcagtg tggtgccttc acccaaagtg tctgacaccg tggtcgagcc ctacaatgcc
721 accctctccg tccatcagtt ggtagagaat actgatgaga cctattgcat tgacaacgag
781 gccctctatg atatctgctt ccgcactctg aagctgacca caccaaccta cggggatctg
841 aaccaccttg tctcagccac catgagtggt gtcaccacct gcctccgttt ccctggccag
901 ctcaatgctg acctccgcaa gttggcagtc aacatggtcc ccttcccacg tctccatttc
961 tttatgcctg gctttgcccc tctcaccagc cgtggaagcc agcagtatcg agctctcaca
1021 gtgccggaac tcacccagca ggtcttcgat gccaaggaca tgatggctgc ctgtgacccc
1081 cgccacggcc gatacctcac cgtggctgct gtcttccgtg gtcggatgtc catgaaggag
1141 gtcgatgagc agatgcttaa cgtgcagaac aagaacagca gctactttgt ggaatggatc
1201 cccaacaatg tcaagacagc cgtctgtgac atcccacctc gtggcctcaa gatggcagtc
1261 accttcattg gcaatagcac agccatccag gagctcttca agcgcatctc ggagcagttc
1321 actgccatgt tccgccggaa ggccttcctc cactggtaca caggcgaggg catggacgag
1381 atggagttca ccgaggctga gagcaacatg aacgacctcg tctctgagta tcagcagtac
1441 caggatgcca ccgcagaaga ggaggaggat ttcggtgagg aggccgaaga ggaggcctaa
1501 ggcagagccc ccatcacctc aggcttctca gttcccttag ccgtcttact caactgcccc
1561 tttcctctcc ctcagaattt gtgtttgctg cctctatctt gttttttgtt ttttcttctg
1621 ggggggggtc tagaacagtg cctggcacat agtaggcgct caataaatac ttgtttgttg
1681 aaaaaaaaaa aaaaaa
//