LOCUS BC020938 2126 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens synaptophysin-like 1, mRNA (cDNA clone MGC:24750 IMAGE:4282246), complete cds. ACCESSION BC020938 VERSION BC020938.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2126) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2126) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (03-JAN-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: CLONTECH Laboratories, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 35 Row: m Column: 10. FEATURES Location/Qualifiers source 1..2126 /db_xref="H-InvDB:HIT000039034" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:24750 IMAGE:4282246" /tissue_type="Brain, primitive neuroectodermal" /clone_lib="NIH_MGC_56" /lab_host="DH10B" /note="Vector: pDNR-LIB" gene 1..2126 /gene="SYPL1" /gene_synonym="H-SP1" /db_xref="GeneID:6856" /db_xref="HGNC:HGNC:11507" CDS 80..805 /gene="SYPL1" /gene_synonym="H-SP1" /codon_start=1 /product="synaptophysin-like 1" /protein_id="AAH20938.1" /db_xref="GeneID:6856" /db_xref="HGNC:HGNC:11507" /translation="MSGFQINLNPLKEPLGFIKVLEWIASIFAFATCGGFKGQTEIQV NCPPAVTENKTVTATFGYPFRLNEASFQPPPGVNICDVNWKDYVLIGDYSSSAQFYVT FAVFVFLYCIAALLLYVGYTSLYLDSRKLPMIDFVVTLVATFLWLVSTSAWAKALTDI KIATGHNIIDELPPCKKKAVLCYFGSVTSMGSLNVSVIFGFLNMILWGGNAWFVYKET SLHSPSNTSAPHSQGGIPPPTGI" BASE COUNT 605 a 375 c 394 g 752 t ORIGIN 1 gccaccgggc tgctctggtc tcgtcggtcc cctcctccgc cccgtcgtcc tgactctctc 61 tccctccttt cctcagagga tgtccggctt ccagatcaac ctcaacccgc tcaaggagcc 121 actcggcttc atcaaggtcc tcgagtggat tgcttctatc tttgcttttg ccacctgtgg 181 aggttttaag ggccaaacag aaattcaagt gaattgtcct cctgcagtta ctgagaataa 241 aactgttaca gctacttttg gttatccatt caggttgaat gaggcatcat ttcagccacc 301 tccaggtgta aacatatgtg atgtaaattg gaaagattac gtcctcatag gcgattactc 361 ttcttctgca caattctatg ttacctttgc agtctttgtg ttcctgtact gcattgctgc 421 ccttctgctt tatgttggct acacgagtct gtatctggat agtcgtaaac ttcctatgat 481 agactttgtt gttacacttg ttgccacttt tttgtggttg gtgagcactt cagcctgggc 541 taaagctctg acagatatta aaatagctac tggtcacaat attattgatg aacttccgcc 601 ttgtaagaag aaagcagtac tgtgttactt tggctctgtg accagtatgg gatccctaaa 661 tgtatctgtg atatttggct ttctaaatat gatactctgg ggaggaaatg cttggtttgt 721 gtacaaggag accagcctac acagtccatc aaatacatct gcccctcata gccaaggagg 781 tattccacct cctaccggaa tataattaaa gggagaaata cactgtatga agtatatgtt 841 gatactatga catgttgcca acaccttgag aagcattatt tgtttctaat aaaagtaatg 901 gctttgtcaa tatattggtg ggtttaaaac tttgctgctt ttttacataa agcctgtgcc 961 tttcctagaa agttaagatg taaatgtatt ctcacatgta aatttgaaag ttcaggggtc 1021 tattatgaaa tgatacacat ttttaaatga accataattt ttttcactaa gctgtttgcc 1081 ttccaaagtg tttacacctt aagccttaac atgtatcttc attcagaaaa cagttatatt 1141 gtcataccat agtaggaaga aaaaccttta tttggaatat acactactgt aagtttgtac 1201 agatcatata cctaccacct gtctttgctt aaagagcctt gattacataa atatgtagga 1261 aaaaacatat tgagttcaaa atttatatct aacattgttt atgttatgat ttttttttaa 1321 ttgcaaagac taggtgtata tttttttctg tttttctaaa tgacccgtgg tacttaatag 1381 gtgtactaaa attgtgttgg gagcagggat ttggaaattt ctgagagatg tgtagttaat 1441 ttagtaattc tgtttcatga gatatgatct gttatgctag tggtttaata ggcttgctat 1501 gtaagtagaa cgtggctcaa ctagatatct ttatatgtat gggcattact cttagtgata 1561 tttgtttcct gtcctttgtt gctcatgctg tttaagtgca ggctgagacc cagcctcttt 1621 gtaagtacag taaaataatc caccgttttt tacagaccct agtcaaaggg ttaaaaaaat 1681 taagattgct ttccatgttt gaaatttacc attgagagtc aatgaagttg ctattttgag 1741 tttagcattg atattgtgaa aataagtgca atttggattt catgtttctt aatattcatt 1801 cttgtttcac aaatgaatga ttaaggaatt atgcatcata aaggaaccta agtgaggtat 1861 atgatgagtg tattgtcttt gcacacacat ataggtatat tctgaataca agcttattca 1921 cattttgctt cctaatcttt ttgttgtaca gggattcagg tttcttattc ttacaacatg 1981 attgtttata tgtgaagcac atcttgctgt tgccttattt ttgatgcttt tattcatgac 2041 aagaattgtc aatataagaa tgtatatctt ttttgcaacc aatttaataa aggagttaaa 2101 aaaaaaaaaa aaaaaaaaaa aaaaaa //