LOCUS BC020923 1528 bp mRNA linear HUM 09-DEC-2005 DEFINITION Homo sapiens chloride intracellular channel 5, mRNA (cDNA clone IMAGE:4247459), complete cds. ACCESSION BC020923 VERSION BC020923.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1528) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1528) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (03-JAN-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: CLONTECH cDNA Library Preparation: CLONTECH Laboratories, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 35 Row: c Column: 12 This clone was selected for full length sequencing because it passed the following selection criteria: Hexamer frequency ORF analysis This clone has the following problem: The cds is short compared to the longest cds in the locus. FEATURES Location/Qualifiers source 1..1528 /db_xref="H-InvDB:HIT000039028" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:4247459" /tissue_type="Skeletal Muscle" /clone_lib="NIH_MGC_81" /lab_host="DH10B" /note="Vector: pDNR-LIB" gene 1..1528 /gene="CLIC5" /gene_synonym="CLIC5B" /gene_synonym="dJ447E21.4" /gene_synonym="MST130" /gene_synonym="MSTP130" /db_xref="GeneID:53405" /db_xref="HGNC:HGNC:13517" /db_xref="IMGT/GENE-DB:13517" /db_xref="MIM:607293" CDS 117..326 /gene="CLIC5" /gene_synonym="CLIC5B" /gene_synonym="dJ447E21.4" /gene_synonym="MST130" /gene_synonym="MSTP130" /codon_start=1 /product="CLIC5 protein" /protein_id="AAH20923.1" /db_xref="GeneID:53405" /db_xref="HGNC:HGNC:13517" /db_xref="IMGT/GENE-DB:13517" /db_xref="MIM:607293" /translation="MALSSAFPSCAGGASEVLILSEKGHTKCEFSQADFPGPYQMKQQ KLFTVLCPMATPQTDNTKHLRTVIR" BASE COUNT 493 a 296 c 283 g 456 t ORIGIN 1 aggcttttaa acgagaggta gagtgaccta gcactaagca aatgagctga aatgtcggaa 61 acagagtcca tcagcttatt tggccacacg atcccaaact agttttatct tgggaaatgg 121 ccctgtcctc agcattccct tcttgtgctg gtggggccag tgaagtcttg atcttatcag 181 aaaaaggcca caccaagtgc gagttttccc aggctgactt tccaggccct tatcaaatga 241 aacaacagaa gctcttcaca gttctgtgcc ccatggccac tccacagaca gacaatacca 301 agcatcttag aactgtcata agataggtca tgcctgaaat agatcttgac catatgagag 361 tcccagaaat cagcaaggcc tggacaaata gaactaagag agaggcagag gcaggaagct 421 gcgggtctat cttgtaaaga gtttagcatc actgtgagag tgtgtgtcta aaattaaatt 481 aaactagaag cagcaggtga gtatttggta agtacttctg tgactcgcct caattcccac 541 tggccagggg ccatctcaac tgcacggtga atcaagatgc tggtgtcatc ctccttggaa 601 aaaggaaatg ttaactcatg gttaaaacta agtacaatga ttcccaaggg atcactttct 661 tattttttta aatgacatta aggagaatct taagaaagca tcagagaaag acatgtgcat 721 gtgaagcacc ctgattctga tgttaggaaa acttaagcga acaggacctg ctgcacacag 781 ccccattgtc ttctatccat ttctctttat cattcaaatc aagcaacatg tgccctcctc 841 atcaacacac attcttcccc tttgtcagta tgcatctccc agcttagtgt caggatactt 901 tcgattcata attatgtatg atccaaagtg tgcataattt catttaacgt taaagaaata 961 gatccaattc ctttcttgca accaaaaata aataaaatac gttgcctcaa tataaggttt 1021 gggctattct gtgtttctat agaagcaatc tgtttttggt aaaatgtact tttaaggatc 1081 cagtcatctg aagtatttta tgtagagtta gagatttcac aatattgact atacatatat 1141 ttaaaatata aattatccag ctgatgtttg aatttgtctt actttcctgg ccacctcgtt 1201 gtcctatttt ataagctggg gagttaacta gcttaacaaa agatgcttag cttttgtaaa 1261 agaacaagtg tttcatttta caaagacact ccaaatgata gttacttgat tttctcgaga 1321 cctttaacta tggtgatgaa taacaggact tgctttcaag ccttaataaa tgtaaaatgc 1381 cttttaatga agatacagct gagtgttttc ctcatgaatc tgaaccaatt accaatttgt 1441 gttccagtct tgattggtat tgactgattc aaataaagtt ggtttatttt caaatattaa 1501 aaaaaaaaaa aaaaaaaaaa aaaaaaaa //