LOCUS BC020915 991 bp mRNA linear HUM 21-JUL-2008
DEFINITION Homo sapiens family with sequence similarity 178, member A, mRNA
(cDNA clone IMAGE:4769051), partial cds.
ACCESSION BC020915
VERSION BC020915.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 991)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 991)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-JAN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: CLONTECH
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 37 Row: l Column: 10
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 27532981.
FEATURES Location/Qualifiers
source 1..991
/db_xref="H-InvDB:HIT000090302"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4769051"
/tissue_type="Placenta"
/clone_lib="NIH_MGC_79"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene <1..991
/gene="FAM178A"
/db_xref="GeneID:55719"
/db_xref="HGNC:HGNC:17814"
CDS <1..150
/gene="FAM178A"
/codon_start=1
/product="FAM178A protein"
/protein_id="AAH20915.1"
/db_xref="GeneID:55719"
/db_xref="HGNC:HGNC:17814"
/translation="KREGGAAHLCSDSLPESQQQDGNHAPNFSSHGSCRRRQRRRHDK
ALHAR"
BASE COUNT 345 a 252 c 217 g 177 t
ORIGIN
1 aagagagaag ggggtgccgc ccacctctgc tccgacagcc tcccggagtc ccagcagcaa
61 gacggcaacc acgcacccaa cttctccagc cacggctcat gccgccgtcg ccagcggcgc
121 cgacatgaca aggcgctgca tgcccgctag gccaggtttc ccctcatccc cagccccggg
181 gtcgtcgccc ccgcgctgcc atctgagacc cggtagtacc gcccatgctg cagcgggaaa
241 gagaacagag agtcctgggg acaggaagca gtcaattata gatttcttca aaccagcttc
301 aaaacaagac agacacatgt tggattcacc acaaaaatca aacatcaaat atggaggaag
361 tagattgtct atcactggga cagagcagtt tgaaaggaaa ctatcctcac caaaagaatc
421 taaacccaaa agggtgccac cagaaaagag ccctattata gaagctttca tgaaaggtgt
481 taaagagcac catgaagatc atggtataca tgagtcacgt cggccttgtc tgtcactagc
541 ctccaaatat ttagccaaag gaacaaatat ctatgttcct tcttcatatc acttgccaaa
601 ggagatgaag tcactaaaga aaaaacatcg atccccagag agaaggaagt cactattcat
661 tcatgaaaat aatgagaaga atgatagaga tcgaggcaaa accaatgcag actccaaaaa
721 gcagaccaca gtggcagaag ctgacatctt caataacagc tccagaagcc ttagcagcag
781 gagcagcctg tccaggcacc acccggaaga aagcccactg ggagctaaat tccagttgtc
841 actagcttct tactgcagag aacgagaact aaagaggttg agaaaggagc aaatggagca
901 gagaatcaac tccgagaatt ctttctcaga agcaagcagt ctttccttaa aatctagtat
961 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa a
//