LOCUS BC020892 1435 bp mRNA linear HUM 18-AUG-2006
DEFINITION Homo sapiens chromosome 10 open reading frame 78, mRNA (cDNA clone
IMAGE:4694255), partial cds.
ACCESSION BC020892
VERSION BC020892.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1435)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1435)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-JAN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Sep 16, 2003 this sequence version replaced BC020892.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: CLONTECH
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 36 Row: n Column: 19.
FEATURES Location/Qualifiers
source 1..1435
/db_xref="H-InvDB:HIT000039023"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4694255"
/tissue_type="Lung"
/clone_lib="NIH_MGC_77"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene <1..1435
/gene="C10orf78"
/gene_synonym="bA373N18.1"
/gene_synonym="FLJ41960"
/gene_synonym="RP11-373N18.1"
/db_xref="GeneID:119392"
/db_xref="HGNC:HGNC:29574"
CDS <1..726
/gene="C10orf78"
/gene_synonym="bA373N18.1"
/gene_synonym="FLJ41960"
/gene_synonym="RP11-373N18.1"
/codon_start=1
/product="C10orf78 protein"
/protein_id="AAH20892.2"
/db_xref="GeneID:119392"
/db_xref="HGNC:HGNC:29574"
/translation="EKNQDFTFKMESPSGSAVVLPSTPQASANPSSPYTNSSRKQPMS
ATLRERLRKTRFSFNSSYNVVKRLKVESEENDQTFSEKPASSTEENCLEFQESFKHID
SEFEENTNLKNTLKNLNVCESQSLDSGSCSALQNEFVSEKLPKQRLNAEKAKLVKQVQ
EKEDLLRRLKLVKMYRSKNDLSQLQLLIKKWRSCSQLLLYELQSAVSEENKKLSLTQL
IDHYGLDDKLLHYNRSEEEFIDV"
BASE COUNT 483 a 265 c 265 g 422 t
ORIGIN
1 gagaaaaacc aagatttcac tttcaagatg gaaagtccgt caggctcagc tgtggtttta
61 cctagcactc ctcaggcctc tgcgaatcca tcatctccct atacaaatag ttcccgaaaa
121 caacctatga gtgcaacact tagagaaaga ttaaggaaaa caagattttc atttaattcc
181 tcttacaatg tggtgaaacg tcttaaagta gagagtgaag aaaatgatca gaccttttca
241 gagaaaccag catcttccac agaggaaaac tgtttggaat ttcaagaaag ttttaaacat
301 atagacagtg aatttgaaga aaatacaaat ttgaaaaata ctttgaagaa tctcaatgtc
361 tgtgaatctc agtcacttga ttctggatca tgcagtgctc tccaaaatga gtttgtgagt
421 gagaagcttc ctaaacaaag attaaacgct gaaaaagcca aattggtgaa gcaggttcag
481 gagaaagaag accttcttcg gaggctaaaa ctagtcaaaa tgtatagatc aaagaatgat
541 ctgtctcagt tacagttgtt aataaagaag tggagaagct gtagccagct cttgctttat
601 gagttgcagt cagctgtgtc tgaagagaac aagaaactaa gccttactca attgatagac
661 cactatgggt tagatgataa attactacac tataacagaa gtgaagaaga atttatagat
721 gtttaattcc tgatttttgc tccagaatat ctttgagaat gacaacttaa tcaaaagata
781 cttaggcact tttttttttt tttgagactg agtttcgctc ttgtcatcct ggctggagtg
841 tgatggtgcg atcttgactc actgcaacct ctgcctctcg ggttccagca attctcctgc
901 ctcagcctcc cgagtagctg agattacagg cgcccgccac catgcccggc taatttttgc
961 atttttagta gagactgggt ttcaccacgt tggccaggct ggtctcgaac tcctgacctc
1021 aggtgatcca ccgcctaggc ctcccaaaac cattagggct cagaggaagg tatcccgatg
1081 aatatcaatt aagggcactt taatatataa attataaact aagttctaaa aggaaaatta
1141 gtattttgga tagatttgtc aaaacgacat ttaagtcatg tttaaaaagt catttgggca
1201 gttctggaaa ctagttttaa tacatttgtt ttttatgaca aaaagtttta ttttaaatgt
1261 taaaaattgt ccaatctggt gaatgtctaa ccctaaagtt taaaaatttc tgcctcctaa
1321 gtttatgtac cttgtttcca tccatttacc acatatttcc atctgataat ctagcaggta
1381 attaaactta tatgtccaaa accgtaaaaa aaaaaaaaaa aaaaaaaaaa aaaaa
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