LOCUS BC020819 1550 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens choline phosphotransferase 1, mRNA (cDNA clone
MGC:23876 IMAGE:4696613), complete cds.
ACCESSION BC020819
VERSION BC020819.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1550)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1550)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-JAN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 36 Row: o Column: 6
This clone was selected for full length sequencing because it
passed the following selection criteria: Similarity but not
identity to protein.
FEATURES Location/Qualifiers
source 1..1550
/db_xref="H-InvDB:HIT000038981"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:23876 IMAGE:4696613"
/tissue_type="Testis, embryonal carcinoma"
/clone_lib="NIH_MGC_61"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..1550
/gene="CHPT1"
/gene_synonym="CPT"
/gene_synonym="CPT1"
/db_xref="GeneID:56994"
/db_xref="HGNC:HGNC:17852"
CDS 178..1398
/gene="CHPT1"
/gene_synonym="CPT"
/gene_synonym="CPT1"
/codon_start=1
/product="choline phosphotransferase 1"
/protein_id="AAH20819.1"
/db_xref="GeneID:56994"
/db_xref="HGNC:HGNC:17852"
/translation="MAAGAGAGSAPRWLRALSEPLSAAQLRRLEEHRYSAAGVSLLEP
PLQLYWTWLLQWIPLWMAPNSITLLGLAVNVVTTLVLISYCPTATEEAPYWTYLLCAL
GLFIYQSLDAIDGKQARRTNSCSPLGELFDHGCDSLSTVFMAVGASIAARLGTYPDWF
FFCSFIGMFVFYCAHWQTYVSGMLRFGKVDVTEIQIALVIVFVLSAFGGATMWDYTIP
ILEIKLKILPVLGFLGGVIFSCSNYFHVILHGGVGKNGSTIAGTSVLSPGLHIGLIII
LAIMIYKKSATDVFEKHPCLYILMFGCVFAKVSQKLVVAHMTKSELYLQDTVFLGPGL
LFLDQYFNNFIDEYVVLWMAMVISSFDMVIYFSALCLQISRHLHLNIFKTACHQAPEQ
VQVLSSKSHQNNMD"
BASE COUNT 364 a 371 c 372 g 443 t
ORIGIN
1 ggggccccgg cagccgggca ggccggcctg acctcgacct ccgccgtgcg ggcccgaccg
61 gtgagtccag cccggcagtc gcaggacccg gccgccagcc tctccctcca cctctccctg
121 cccccagcgc caggcgcggg ctgcgctcgg tggcggcggc ggggccctca ggcggccatg
181 gcggcaggcg ccggggccgg gtccgcgccg cgctggctga gggcgctgag cgagccgctg
241 agcgcggcgc agctgcggcg actggaggag caccgctaca gcgcggcggg cgtctcgctg
301 ctcgagccgc cgctgcagct ctactggacc tggctgctcc agtggatccc gctctggatg
361 gcccccaact ccatcaccct gctggggctc gccgtcaacg tggtcaccac gctcgtgctc
421 atctcctact gtcccacggc caccgaagag gcaccatact ggacatacct tttatgtgca
481 ctgggacttt ttatttacca gtcactggat gctattgatg ggaaacaagc cagaagaaca
541 aactcttgtt cccctttagg ggagctcttt gaccatggct gtgactctct ttccacagta
601 tttatggcag tgggagcttc aattgccgct cgcttaggaa cttatcctga ctggtttttt
661 ttctgctctt ttattgggat gtttgtgttt tattgcgctc attggcagac ttatgtttca
721 ggcatgttga gatttggaaa agtggatgta actgaaattc agatagcttt agtgattgtc
781 tttgtgttgt ctgcatttgg aggagcaaca atgtgggact atacgattcc tattctagaa
841 ataaaattga agatccttcc agttcttgga tttctaggtg gagtaatatt ttcctgttca
901 aattatttcc atgttatcct ccatggtggt gttggcaaga atggatccac tatagcaggc
961 accagtgtct tgtcacctgg actccacata ggactaatta ttatactggc aataatgatc
1021 tataaaaagt cagcaactga tgtgtttgaa aagcatcctt gtctttatat cctaatgttt
1081 ggatgtgtct ttgctaaagt ctcacaaaaa ttagtggtag ctcacatgac caaaagtgaa
1141 ctatatcttc aagacactgt ctttttgggg ccaggtcttt tgtttttaga ccagtacttt
1201 aataacttta tagacgaata tgttgttcta tggatggcaa tggtgatttc ttcatttgat
1261 atggtgatat actttagtgc tttgtgcctg caaatttcaa gacaccttca tctaaatata
1321 ttcaagactg catgtcatca agcacctgaa caggttcaag ttctttcttc aaagagtcat
1381 cagaataaca tggattgaag agacttccga acacttgcta tctcttgctg ctgctgtttc
1441 atggaaggag atattaaaca tttgtttaat ttttatttaa gtgttatacc tatttcagca
1501 aataaaatat ttcattgctt aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
//