LOCUS BC020818 1674 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens Sjogren syndrome antigen B (autoantigen La), mRNA
(cDNA clone MGC:23872 IMAGE:4338551), complete cds.
ACCESSION BC020818
VERSION BC020818.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1674)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1674)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-JAN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: CLONTECH
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 36 Row: e Column: 10
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 31543654.
FEATURES Location/Qualifiers
source 1..1674
/db_xref="H-InvDB:HIT000038980"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:23872 IMAGE:4338551"
/tissue_type="Skeletal Muscle"
/clone_lib="NIH_MGC_81"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..1674
/gene="SSB"
/gene_synonym="La"
/gene_synonym="LARP3"
/db_xref="GeneID:6741"
/db_xref="HGNC:HGNC:11316"
/db_xref="MIM:109090"
CDS 108..1334
/gene="SSB"
/gene_synonym="La"
/gene_synonym="LARP3"
/codon_start=1
/product="Sjogren syndrome antigen B (autoantigen La)"
/protein_id="AAH20818.1"
/db_xref="GeneID:6741"
/db_xref="HGNC:HGNC:11316"
/db_xref="MIM:109090"
/translation="MAENGDNEKMAALEAKICHQIEYYFGDFNLPRDKFLKEQIKLDE
GWVPLEIMIKFNRLNRLTTDFNVIVEALSKSKAELMEISEDKTKIRRSPSKPLPEVTD
EYKNDVKNRSVYIKGFPTDATLDDIKEWLEDKGQVLNIQMRRTLHKAFKGSIFVVFDS
IESAKKFVETPGQKYKETDLLILFKDDYFAKKNEERKQNKVEAKLRAKQEQEAKQKLE
EDAEMKSLEEKIGCLLKFSGDLDDQTCREDLHILFSNHGEIKWIDFVRGAKEGIILFK
EKAKEALGKAKDANNGNLQLRNKEVTWEVLEGEVEKEALKKIIEDQQESLNKWKSKGR
RFKGKGKGNKAAQPGSGKGKVQFQGKKTKFASDDEHDEHDENGATGPVKRAREETDKE
EPASKQQKTENGAGDQ"
BASE COUNT 657 a 233 c 371 g 413 t
ORIGIN
1 ggagcgcttt aggctggccg gcggcgctgg gaggtggagt cgttgctgtt gctgtttgtg
61 agcctgtggc gcggcttctg tgggccggaa ccttaaagat agccgcaatg gctgaaaatg
121 gtgataatga aaagatggct gccctggagg ccaaaatctg tcatcaaatt gagtattatt
181 ttggcgactt caatttgcca cgggacaagt ttctaaagga acagataaaa ctggatgaag
241 gctgggtacc tttggagata atgataaaat tcaacaggtt gaaccgtcta acaacagact
301 ttaatgtaat tgtggaagca ttgagcaaat ccaaggcaga actcatggaa atcagtgaag
361 ataaaactaa aatcagaagg tctccaagca aacccctacc tgaagtgact gatgagtata
421 aaaatgatgt aaaaaacaga tctgtttata ttaaaggctt cccaactgat gcaactcttg
481 atgacataaa agaatggtta gaagataaag gtcaagtact aaatattcag atgagaagaa
541 cattgcataa agcatttaag ggatcaattt ttgttgtgtt tgatagcatt gaatctgcta
601 agaaatttgt agagacccct ggccagaagt acaaagaaac agacctgcta atacttttca
661 aggacgatta ctttgccaaa aaaaatgaag aaagaaaaca aaataaagtg gaagctaaat
721 taagagctaa acaggagcaa gaagcaaaac aaaagttaga agaagatgct gaaatgaaat
781 ctctagaaga aaagattgga tgcttgctga aattttcggg tgatttagat gatcagacct
841 gtagagaaga tttacacata cttttctcaa atcatggtga aataaaatgg atagacttcg
901 tcagaggagc aaaagagggg ataattctat ttaaagaaaa agccaaggaa gcattgggta
961 aagccaaaga tgcaaataat ggtaacctac aattaaggaa caaagaagtg acttgggaag
1021 tactagaagg agaggtggaa aaagaagcac tgaagaaaat aatagaagac caacaagaat
1081 ccctaaacaa atggaagtca aaaggtcgta gatttaaagg aaaaggaaag ggtaataaag
1141 ctgcccagcc tgggtctggt aaaggaaaag tacagtttca gggcaagaaa acgaaatttg
1201 ctagtgatga tgaacatgat gaacatgatg aaaatggtgc aactggacct gtgaaaagag
1261 caagagaaga aacagacaaa gaagaacctg catccaaaca acagaaaaca gaaaatggtg
1321 ctggagacca gtagtttagt aaaccaattt tttattcatt ttaaataggt tttaaacgac
1381 ttttgtttgc ggggctttta aaaggaaaac cgaattaggt ccacttcaat gtccacctgt
1441 gagaaaggaa aaattttttt gttgtttaac ttgtcttttt gttatgcaaa tgagatttct
1501 ttgaatgtat tgttctgttt gtgttatttc agatgattca aatatcaaaa ggaagattct
1561 tccattaaat tgcctttgta atatgagaat gtattagtac aaactaacta ataaaatata
1621 tactatatga aaagagcaaa aaccaaaaaa aaaaaaaaaa aaaaaaaaaa aaaa
//