LOCUS BC020807 893 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens proteasome (prosome, macropain) subunit, beta type, 1,
mRNA (cDNA clone MGC:23837 IMAGE:4281426), complete cds.
ACCESSION BC020807
VERSION BC020807.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 893)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 893)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-JAN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 35 Row: l Column: 9.
FEATURES Location/Qualifiers
source 1..893
/db_xref="H-InvDB:HIT000038973"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:23837 IMAGE:4281426"
/tissue_type="Brain, primitive neuroectodermal"
/clone_lib="NIH_MGC_56"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..893
/gene="PSMB1"
/gene_synonym="FLJ25321"
/gene_synonym="HC5"
/gene_synonym="PMSB1"
/gene_synonym="PSC5"
/db_xref="GeneID:5689"
/db_xref="HGNC:HGNC:9537"
/db_xref="MIM:602017"
CDS 39..764
/gene="PSMB1"
/gene_synonym="FLJ25321"
/gene_synonym="HC5"
/gene_synonym="PMSB1"
/gene_synonym="PSC5"
/codon_start=1
/product="proteasome (prosome, macropain) subunit, beta
type, 1"
/protein_id="AAH20807.1"
/db_xref="GeneID:5689"
/db_xref="HGNC:HGNC:9537"
/db_xref="MIM:602017"
/translation="MLSSTAMYSAPGRDLGMEPHRAAGPLQLRFSPYVFNGGTILAIA
GEDFAIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTKIIEARLKM
YKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDPVGSYQR
DSFKAGGSASAMLQPLLDNQVGFKNMQNVEHVPLSLDRAMRLVKDVFISAAERDVYTG
DALRICIVTKEGIREETVSLRKD"
BASE COUNT 254 a 183 c 227 g 229 t
ORIGIN
1 gagacagcaa gtgtcggatc cgcaggcgca gccgtgcgat gttgtcctct acagccatgt
61 attcggctcc tggcagagac ttggggatgg aaccgcacag agccgcgggc cctttgcagc
121 tgcgattttc gccctacgtt ttcaacggag gtactatact ggcaattgct ggagaagatt
181 ttgcaattgt tgcttctgat actcgattga gtgaagggtt ttcaattcat acgcgggata
241 gccccaaatg ttacaaatta acagacaaaa cagtcattgg atgcagcggt tttcatggag
301 actgtcttac gctgacaaag attattgaag caagactaaa gatgtataag cattccaata
361 ataaggccat gactacgggg gcaattgctg caatgctgtc tacaatcctg tattcaaggc
421 gcttctttcc atactatgtt tacaacatca tcggtggact tgatgaagaa ggaaaggggg
481 ctgtatacag ctttgatcca gtagggtctt accagagaga ctccttcaag gctggaggct
541 cagcaagtgc catgctacag cccctgcttg acaaccaggt tggttttaag aacatgcaga
601 atgtggagca tgttccgctg tccttggaca gagccatgcg gctggtgaaa gatgtcttca
661 tttctgcggc tgagagagat gtgtacactg gggacgcact ccggatctgc atagtgacca
721 aagagggcat cagggaggaa actgtttcct taaggaagga ctgatctgtg tgctcttatc
781 accaatcagt tcagacctgg ttgattttgt actttggaac tgtaccttgg atggttttgt
841 ttattaaaag agaaacctga accaaaaaaa aaaaaaaaaa aaaaaaaaaa aaa
//