LOCUS BC020805 1357 bp mRNA linear HUM 03-NOV-2006
DEFINITION Homo sapiens tRNA splicing endonuclease 34 homolog (S. cerevisiae),
mRNA (cDNA clone MGC:23828 IMAGE:4277870), complete cds.
ACCESSION BC020805
VERSION BC020805.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1357)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1357)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-JAN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 35 Row: k Column: 2
This clone was selected for full length sequencing because it
passed the following selection criteria: Similarity but not
identity to protein.
FEATURES Location/Qualifiers
source 1..1357
/db_xref="H-InvDB:HIT000038972"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:23828 IMAGE:4277870"
/tissue_type="Brain, primitive neuroectodermal"
/clone_lib="NIH_MGC_56"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..1357
/gene="TSEN34"
/gene_synonym="SEN34"
/gene_synonym="SEN34L"
/db_xref="GeneID:79042"
/db_xref="HGNC:HGNC:15506"
/db_xref="MIM:608754"
CDS 92..1024
/gene="TSEN34"
/gene_synonym="SEN34"
/gene_synonym="SEN34L"
/codon_start=1
/product="tRNA splicing endonuclease 34 homolog (S.
cerevisiae)"
/protein_id="AAH20805.1"
/db_xref="GeneID:79042"
/db_xref="HGNC:HGNC:15506"
/db_xref="MIM:608754"
/translation="MLVVEVANGRSLVWGAEAVQALRERLGVGGRTVGALPRGPRQNS
RLGLPLLLMPEEARLLAEIGAVTLVSAPRPDSRHHSLALTSFKRQQEESFQEQSALAA
EARETRRQELLEKITEGQAAKKQKLEQASGASSSQEAGSSQAAKEDETSDGQASGEQE
EAGPSSSQAGPSNGVAPLPRSALLVQLATARPRPVKARPLDWRVQSKDWPHAGRPAHE
LRYSIYRDLWERGFFLSAAGKFGGDFLVYPGDPLRFHAHYIAQCWAPEDTIPLQDLVA
AGRLGTSVRKTLLLCSPQPDGKVVYTSLQWASLQ"
BASE COUNT 260 a 409 c 404 g 284 t
ORIGIN
1 gccgagaccc cggaggcttt gggtgcgctg cagcggtctg cggcgcgcag ctgtttcggt
61 aactgctttg cctcccggct cccgcaggag gatgctggtg gtggaggtgg cgaacggccg
121 ctccctggtg tggggagccg aggcggtgca ggccctccgg gagcgcctgg gtgtgggggg
181 ccgcacggta ggcgccctgc cccgcgggcc ccgccagaac tcgcgcctgg gcctcccgct
241 gctgctgatg cccgaagagg cgcggctctt ggccgagatc ggcgccgtga ctctggtcag
301 cgccccgcgt ccagactctc ggcaccacag cctggccctg acatccttca agcgccagca
361 agaggagagc ttccaggagc agagcgcctt ggcagctgag gcccgggaga cccgtcgtca
421 ggagctcctg gagaagatta cggagggcca ggctgctaag aagcagaaac tagaacaggc
481 ttcaggggcc agctcaagcc aggaggccgg ctcgagccag gctgccaaag aggatgagac
541 cagtgatggc caggcttcgg gagagcagga ggaagctggc ccctcgtctt cccaagcagg
601 accctcaaat ggggtagccc ccttgcccag atctgctctc cttgtccagc tggccactgc
661 caggcctcga ccggtcaagg ccaggcccct ggactggcgt gtccagtcta aagactggcc
721 ccacgccggc cgccctgccc acgagctgcg ctacagtatc tacagagacc tgtgggagcg
781 aggcttcttc ctcagtgcgg ctggcaagtt cggaggtgac ttcctggtct atcctggtga
841 ccccctccgc ttccacgccc attatatcgc tcagtgctgg gcccccgagg acaccatccc
901 actccaagac ctggttgctg ctgggcgcct tggaaccagc gtcagaaaga ccctgctcct
961 ctgttctccg cagcctgatg gtaaggtggt ctacacctcc ctgcaatggg ccagcctgca
1021 gtgaactcca gagacctagg ggatgtggct gtgtcggcag caagagcctt tctggatgtt
1081 ccccagctct tctctgggag tctagaacat cctcctacct ttctccgcgg ttagtttttg
1141 attccaggtt ttcgaacact acatcttttt tatgttcttc cttgtttcaa agcacttatt
1201 ggctgtgttt ttgtagttac ctattttcac actgtgagct tcccgagaat ggggcctggg
1261 tttgattcat ctgttttcta cagggtttaa gtctcaggag gtctcaataa acttggtata
1321 taaatgtcaa aaaaaaaaaa aaaaaaaaaa aaaaaaa
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