LOCUS BC020800 908 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens peptidylprolyl isomerase B (cyclophilin B), mRNA (cDNA
clone MGC:23783 IMAGE:4248828), complete cds.
ACCESSION BC020800
VERSION BC020800.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 908)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 908)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-JAN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: CLONTECH
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 35 Row: d Column: 19.
FEATURES Location/Qualifiers
source 1..908
/db_xref="H-InvDB:HIT000038969"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:23783 IMAGE:4248828"
/tissue_type="Prostate"
/clone_lib="NIH_MGC_83"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..908
/gene="PPIB"
/gene_synonym="CYP-S1"
/gene_synonym="CYPB"
/gene_synonym="MGC14109"
/gene_synonym="MGC2224"
/gene_synonym="SCYLP"
/db_xref="GeneID:5479"
/db_xref="HGNC:HGNC:9255"
/db_xref="MIM:123841"
CDS 26..676
/gene="PPIB"
/gene_synonym="CYP-S1"
/gene_synonym="CYPB"
/gene_synonym="MGC14109"
/gene_synonym="MGC2224"
/gene_synonym="SCYLP"
/codon_start=1
/product="peptidylprolyl isomerase B (cyclophilin B)"
/protein_id="AAH20800.1"
/db_xref="GeneID:5479"
/db_xref="HGNC:HGNC:9255"
/db_xref="MIM:123841"
/translation="MLRLSERNMKVLLAAALIAGSVFFLLLPGPSAADEKKKGPKVTV
KVYFDLRIGDEDVGRVIFGLFGKTVPKTVDNFVALATGEKGFGYKNSKFHRVIKDFMI
QGGDFTRGDGTGGKSIYGERFPDENFKLKHYGPGWVSMANAGKDTNGSQFFITTVKTA
WLDGKHVVFGKVLEGMEVVRKVESTKTDSRDKPLKDVIIADCGKIEVEKPFAIAKE"
BASE COUNT 245 a 223 c 252 g 188 t
ORIGIN
1 gggctgcttt cgcctccgcc tgtggatgct gcgcctctcc gaacgcaaca tgaaggtgct
61 ccttgccgcc gccctcatcg cggggtccgt cttcttcctg ctgctgccgg gaccttctgc
121 ggccgatgag aagaagaagg ggcccaaagt caccgtcaag gtgtattttg acctacgaat
181 tggagatgaa gatgtaggcc gggtgatctt tggtctcttc ggaaagactg ttccaaaaac
241 agtggataat tttgtggcct tagctacagg agagaaagga tttggctaca aaaacagcaa
301 attccatcgt gtaatcaagg acttcatgat ccagggcgga gacttcacca ggggagatgg
361 cacaggagga aagagcatct acggtgagcg cttccccgat gagaacttca aactgaagca
421 ctacgggcct ggctgggtga gcatggccaa cgcaggcaaa gacaccaacg gctcccagtt
481 cttcatcacg acagtcaaga cagcctggct agatggcaag catgtggtgt ttggcaaagt
541 tctagagggc atggaggtgg tgcggaaggt ggagagcacc aagacagaca gccgggataa
601 acccctgaag gatgtgatca tcgcagactg cggcaagatc gaggtggaga agccctttgc
661 catcgccaag gagtagggca cagggacatc tttctttgag tgaccgtctg tgcaggccct
721 gtagtccgcc acagggctct gagctgcact ggccccggtg ctggcatctg gtggagggga
781 cccactcccc tcacattcca caggcccatg gactcacttt tgtaacaaac tcctaccaac
841 actgaccaat aaaaaaaaat gtgggttttt ttttttttaa aaaaaaaaaa aaaaaaaaaa
901 aaaaaaaa
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